RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 SNRNP70P08621 437 aaKnown RBP11.21□□□□□ -0.61
CLK3-204ENST00000483723 GPX4P36969 197 aaPredicted RBP11.21□□□□□ -0.61
CLK3-204ENST00000483723 TNXAQ16473 311 aa11.21□□□□□ -0.61
CLK3-204ENST00000483723 LRRC75A-AS1Q8N1F1 130 aa11.21□□□□□ -0.61
CLK3-204ENST00000483723 ZNF114Q8NC26 417 aa11.21□□□□□ -0.61
CLK3-204ENST00000483723 CACNG8Q8WXS5 425 aa11.21□□□□□ -0.61
CLK3-204ENST00000483723 SRSF8Q9BRL6 282 aaKnown RBP11.21□□□□□ -0.61
CLK3-204ENST00000483723 TMEM218A2RU14 115 aa11.21□□□□□ -0.62
CLK3-204ENST00000483723 NPFFO15130 113 aa11.21□□□□□ -0.62
CLK3-204ENST00000483723 PAX6P26367 422 aa11.21□□□□□ -0.62
CLK3-204ENST00000483723 SUB1P53999 127 aaKnown RBP eCLIP11.21□□□□□ -0.62
CLK3-204ENST00000483723 CD69Q07108 199 aa11.21□□□□□ -0.62
CLK3-204ENST00000483723 ZNF726P1Q15940 193 aa11.21□□□□□ -0.62
CLK3-204ENST00000483723 FBLN7Q53RD9 439 aa11.21□□□□□ -0.62
CLK3-204ENST00000483723 MRPL41Q8IXM3 137 aaKnown RBP11.21□□□□□ -0.62
CLK3-204ENST00000483723 ZNF709Q8N972 641 aa11.21□□□□□ -0.62
CLK3-204ENST00000483723 RNASEH2CQ8TDP1 164 aaKnown RBP11.21□□□□□ -0.62
CLK3-204ENST00000483723 P2RX4Q99571 388 aa11.21□□□□□ -0.62
CLK3-204ENST00000483723 MGST2Q99735 147 aa11.21□□□□□ -0.62
CLK3-204ENST00000483723 MED13LQ71F56 2210 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 ABCA2Q9BZC7 2435 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 TEX22C9J3V5 150 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 ACTL6BO94805 426 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 HBE1P02100 147 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 MSMBP08118 114 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 OR13C7P0DN81 318 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 SAA4P35542 130 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 OPRK1P41145 380 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 CCL20P78556 96 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 MMDQ15546 238 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 TMEM144Q7Z5S9 345 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 PIP4P2Q8N4L2 257 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 RPP25LQ8N5L8 163 aaKnown RBP11.2□□□□□ -0.62
CLK3-204ENST00000483723 PSMG3-AS1Q96PY0 264 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 WNK2Q9Y3S1 2297 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 COL12A1Q99715 3063 aa11.2□□□□□ -0.62
CLK3-204ENST00000483723 B4DSR2 109 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 AGPAT2O15120 278 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 CD24P25063 80 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 HNF4GQ14541 408 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 C5orf64Q2M2E5 130 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 FFAR4Q5NUL3 377 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 C10orf91Q5T1B1 145 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 TEPPQ6URK8 271 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 RCC1LQ96I51 464 aaKnown RBP11.19□□□□□ -0.62
CLK3-204ENST00000483723 GGTLC1Q9BX51 225 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 KIAA1456Q9P272 454 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 PLXNB1O43157 2135 aa11.19□□□□□ -0.62
CLK3-204ENST00000483723 IGHV1-69DA0A0B4J2H0 117 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 SMCO3A2RU48 225 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 IGHV1-69P01742 117 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 RAB2AP61019 212 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 PMS2P11Q13670 270 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 MLANAQ16655 118 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 GUK1Q16774 197 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 DEFB113Q30KQ7 82 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 SFT2D1Q8WV19 159 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 SRSF12Q8WXF0 261 aaKnown RBP11.18□□□□□ -0.62
CLK3-204ENST00000483723 FAM96BQ9Y3D0 163 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 TRAV20A0A0B4J274 112 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 C9JQL5 133 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 CRYGCP07315 174 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 M6PRP20645 277 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 BRS3P32247 399 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
CLK3-204ENST00000483723 ELLP55199 621 aaPredicted RBP11.18□□□□□ -0.62
CLK3-204ENST00000483723 AKR1C1Q04828 323 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 GAMTQ14353 236 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 HES1Q14469 280 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 SSX7Q7RTT5 188 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 OR10G4Q8NGN3 311 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 OR10G9Q8NGN4 311 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 OR10G7Q8NGN6 311 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
CLK3-204ENST00000483723 HECTD1Q9ULT8 2610 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 SEC14L6B5MCN3 397 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 YIF1AO95070 293 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 FAM106CPP0CH98 169 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 AREGP15514 252 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 GATA3P23771 443 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 MFAP2P55001 183 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 LOXL1Q08397 574 aaPredicted RBP11.17□□□□□ -0.62
CLK3-204ENST00000483723 PEA15Q15121 130 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 PLGLAQ15195 96 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 ACOT6Q3I5F7 207 aaPredicted RBP11.17□□□□□ -0.62
CLK3-204ENST00000483723 ZNF562Q6V9R5 426 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 OR1P1Q8NH06 330 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 MBD6Q96DN6 1003 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 MEGF9Q9H1U4 602 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 FNDC4Q9H6D8 234 aaPredicted RBP11.17□□□□□ -0.62
CLK3-204ENST00000483723 TMEM231Q9H6L2 316 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 TREM1Q9NP99 234 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 KCNIP2Q9NS61 270 aa11.17□□□□□ -0.62
CLK3-204ENST00000483723 LRRK2Q5S007 2527 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 IGKV1OR2-108A0A075B7D4 117 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 CTXND1A0A1B0GTU2 59 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 CYB5BO43169 146 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 TMEM11P17152 192 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 PRR20EP86478 221 aa11.16□□□□□ -0.62
CLK3-204ENST00000483723 PRR20CP86479 221 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms