RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 CDX1P47902 265 aaPredicted RBP13.36□□□□□ -0.27
CCNY-202ENST00000339497 SPANXN1Q5VSR9 72 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 FOXL2NBQ6ZUU3 175 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 TMEM116Q8NCL8 245 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 GSX1Q9H4S2 264 aaPredicted RBP13.36□□□□□ -0.27
CCNY-202ENST00000339497 HLA-DQA1P01909 254 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 LCN2P80188 198 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 CHODLQ9H9P2 273 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.36□□□□□ -0.27
CCNY-202ENST00000339497 TMEM189A5PLL7 270 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 OR9G9P0C7N8 305 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 PKIAP61925 76 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 NOTCH2Q04721 2471 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 CUL9Q8IWT3 2517 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 PTPRQQ9UMZ3 2332 aa13.36□□□□□ -0.27
CCNY-202ENST00000339497 TRBV23-1A0A0A0MS06 115 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 FOSL1P15407 271 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 MIR17HGQ75NE6 70 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 SRSF12Q8WXF0 261 aaKnown RBP13.35□□□□□ -0.27
CCNY-202ENST00000339497 IGHV3OR16-8A0A075B7F1 116 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 ICAM4Q14773 271 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 NBEAP1P0C6P0 100 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 SRIP30626 198 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 GCSAMLQ5JQS6 135 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 TMEM78Q5T7P6 136 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 MRPL32Q9BYC8 188 aaKnown RBP13.35□□□□□ -0.27
CCNY-202ENST00000339497 VSIRQ9H7M9 311 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 PLCE1Q9P212 2302 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 CD24P25063 80 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 C16orf92Q96LL3 132 aa13.35□□□□□ -0.27
CCNY-202ENST00000339497 IGKV1D-33P01593 117 aa13.34□□□□□ -0.27
CCNY-202ENST00000339497 IGKV1-33P01594 117 aa13.34□□□□□ -0.27
CCNY-202ENST00000339497 MGPP08493 103 aa13.34□□□□□ -0.27
CCNY-202ENST00000339497 TCTAP57738 103 aa13.34□□□□□ -0.27
CCNY-202ENST00000339497 VENTXO95231 258 aa13.34□□□□□ -0.27
CCNY-202ENST00000339497 IGHV3-23P01764 117 aa13.34□□□□□ -0.27
CCNY-202ENST00000339497 CDKN1AP38936 164 aa13.34□□□□□ -0.27
CCNY-202ENST00000339497 METTL26Q96S19 204 aa13.34□□□□□ -0.27
CCNY-202ENST00000339497 SDF2L1Q9HCN8 221 aa13.34□□□□□ -0.27
CCNY-202ENST00000339497 IGHV3-49A0A0A0MS15 119 aa13.33□□□□□ -0.27
CCNY-202ENST00000339497 UPK2O00526 184 aa13.33□□□□□ -0.27
CCNY-202ENST00000339497 LINC00205P59089 165 aa13.33□□□□□ -0.27
CCNY-202ENST00000339497 PAFAH1B2P68402 229 aa13.33□□□□□ -0.27
CCNY-202ENST00000339497 TWIST1Q15672 202 aa13.33□□□□□ -0.27
CCNY-202ENST00000339497 NMSQ5H8A3 153 aa13.33□□□□□ -0.27
CCNY-202ENST00000339497 RNASE6Q93091 150 aaKnown RBP13.33□□□□□ -0.27
CCNY-202ENST00000339497 BET1LQ9NYM9 111 aa13.33□□□□□ -0.27
CCNY-202ENST00000339497 C1QTNF9BB2RNN3 333 aa13.33□□□□□ -0.28
CCNY-202ENST00000339497 IGKV1-5P01602 117 aa13.33□□□□□ -0.28
CCNY-202ENST00000339497 C20orf204Q6ZNR8 217 aa13.33□□□□□ -0.28
CCNY-202ENST00000339497 C1orf147Q96MC9 270 aaPredicted RBP13.33□□□□□ -0.28
CCNY-202ENST00000339497 SLC25A15Q9Y619 301 aa13.33□□□□□ -0.28
CCNY-202ENST00000339497 C15orf61A6NNL5 157 aa13.33□□□□□ -0.28
CCNY-202ENST00000339497 NEU1Q99519 415 aa13.33□□□□□ -0.28
CCNY-202ENST00000339497 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
CCNY-202ENST00000339497 RPL7P18124 248 aaKnown RBP13.33□□□□□ -0.28
CCNY-202ENST00000339497 TIMP3P35625 211 aa13.33□□□□□ -0.28
CCNY-202ENST00000339497 RELBQ01201 579 aa13.33□□□□□ -0.28
CCNY-202ENST00000339497 CD177Q8N6Q3 437 aa13.33□□□□□ -0.28
CCNY-202ENST00000339497 TMEM144Q7Z5S9 345 aa13.32□□□□□ -0.28
CCNY-202ENST00000339497 MALRD1Q5VYJ5 2156 aa13.32□□□□□ -0.28
CCNY-202ENST00000339497 TRAV30A0A087WSZ9 112 aa13.32□□□□□ -0.28
CCNY-202ENST00000339497 C19orf35Q6ZS72 473 aa13.32□□□□□ -0.28
CCNY-202ENST00000339497 SH2D7A6NKC9 451 aaPredicted RBP13.32□□□□□ -0.28
CCNY-202ENST00000339497 FOXA2Q9Y261 457 aaPredicted RBP13.32□□□□□ -0.28
CCNY-202ENST00000339497 MLNRO43193 412 aa13.32□□□□□ -0.28
CCNY-202ENST00000339497 NTF4P34130 210 aa13.32□□□□□ -0.28
CCNY-202ENST00000339497 RBFOX2O43251 390 aaKnown RBP eCLIP13.31□□□□□ -0.284e-9■■■□□ 17.2
CCNY-202ENST00000339497 RNF224P0DH78 156 aa13.31□□□□□ -0.28
CCNY-202ENST00000339497 CA7P43166 264 aa13.31□□□□□ -0.28
CCNY-202ENST00000339497 ZNF738Q8NE65 137 aa13.31□□□□□ -0.28
CCNY-202ENST00000339497 RPL23P62829 140 aaKnown RBP13.31□□□□□ -0.28
CCNY-202ENST00000339497 VPS25Q9BRG1 176 aa13.31□□□□□ -0.28
CCNY-202ENST00000339497 PGPEP1LA6NFU8 196 aa13.31□□□□□ -0.28
CCNY-202ENST00000339497 COX6B1P14854 86 aa13.31□□□□□ -0.28
CCNY-202ENST00000339497 SRSF7Q16629 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCNY-202ENST00000339497 Q6P435 159 aa13.31□□□□□ -0.28
CCNY-202ENST00000339497 OR4C5Q8NGB2 326 aa13.31□□□□□ -0.28
CCNY-202ENST00000339497 IMMP2LQ96T52 175 aa13.31□□□□□ -0.28
CCNY-202ENST00000339497 HSPB8Q9UJY1 196 aa13.31□□□□□ -0.28
CCNY-202ENST00000339497 GPX4P36969 197 aaPredicted RBP13.3□□□□□ -0.28
CCNY-202ENST00000339497 HERPUD1Q15011 391 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 CACNG8Q8WXS5 425 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 CENPFP49454 3210 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 FOXH1O75593 365 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 AMY1AP04745 511 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 FOXA3P55318 350 aaPredicted RBP13.3□□□□□ -0.28
CCNY-202ENST00000339497 C10orf55Q5SWW7 151 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 MBNL2Q5VZF2 373 aaKnown RBP13.3□□□□□ -0.28
CCNY-202ENST00000339497 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
CCNY-202ENST00000339497 PIMREGQ9BSJ6 248 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 RPUSD1Q9UJJ7 312 aaKnown RBP13.3□□□□□ -0.28
CCNY-202ENST00000339497 WDR83OSQ9Y284 106 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 LOC105371267A0A1B0GV96 52 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 CKS2P33552 79 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 RSPO1Q2MKA7 263 aaPredicted RBP13.3□□□□□ -0.28
CCNY-202ENST00000339497 COQ2Q96H96 371 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 TMEM133Q9H2Q1 129 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 MAS1LP35410 378 aa13.3□□□□□ -0.28
CCNY-202ENST00000339497 OR10W1Q8NGF6 305 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms