RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 FBLN7Q53RD9 439 aa17.93■□□□□ 0.46
SIX3-201ENST00000260653 BPIFCQ8NFQ6 507 aa17.93■□□□□ 0.46
SIX3-201ENST00000260653 FBXL15Q9H469 300 aa17.93■□□□□ 0.46
SIX3-201ENST00000260653 TMEM231Q9H6L2 316 aa17.93■□□□□ 0.46
SIX3-201ENST00000260653 IGKV1D-33P01593 117 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 IGKV1-33P01594 117 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 KRTAP10-9P60411 292 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 RPRMQ9NS64 109 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 RNASE2P10153 161 aaKnown RBP17.92■□□□□ 0.46
SIX3-201ENST00000260653 PAX1P15863 534 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 DLK1P80370 383 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 WT1-ASQ06250 92 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 BSXQ3C1V8 233 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 MINOS1Q5TGZ0 78 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 UQCC3Q6UW78 93 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 NARS2Q96I59 477 aaKnown RBP17.92■□□□□ 0.46
SIX3-201ENST00000260653 WDR83OSQ9Y284 106 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 FAM96BQ9Y3D0 163 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 TIMM9Q9Y5J7 89 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 MINOS1-NBL1R4GNA1 71 aa17.92■□□□□ 0.46
SIX3-201ENST00000260653 A6NJY4 79 aa17.91■□□□□ 0.46
SIX3-201ENST00000260653 SNCAP37840 140 aa17.91■□□□□ 0.46
SIX3-201ENST00000260653 UBE2E1P51965 193 aa17.91■□□□□ 0.46
SIX3-201ENST00000260653 SERF2P84101 59 aa17.91■□□□□ 0.46
SIX3-201ENST00000260653 MMD2Q8IY49 270 aa17.91■□□□□ 0.46
SIX3-201ENST00000260653 GGACTQ9BVM4 153 aa17.91■□□□□ 0.46
SIX3-201ENST00000260653 TNXAQ16473 311 aa17.91■□□□□ 0.46
SIX3-201ENST00000260653 ARSJQ5FYB0 599 aaPredicted RBP17.91■□□□□ 0.46
SIX3-201ENST00000260653 TREML4Q6UXN2 200 aa17.91■□□□□ 0.46
SIX3-201ENST00000260653 CENPVQ7Z7K6 275 aaPredicted RBP17.91■□□□□ 0.46
SIX3-201ENST00000260653 PPP1R27Q86WC6 154 aa17.91■□□□□ 0.46
SIX3-201ENST00000260653 RNF5Q99942 180 aa17.91■□□□□ 0.46
SIX3-201ENST00000260653 A0A1W2PN81 502 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 CHRNA7P36544 502 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 MMDQ15546 238 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 C2orf83Q53S99 150 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 NAV2Q8IVL1 2488 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 KRBOX1C9JBD0 128 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 INS-IGF2F8WCM5 200 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 ACTL6BO94805 426 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 H2AFB1P0C5Y9 115 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 PLA2G2AP14555 144 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 ACSM6Q6P461 480 aa17.9■□□□□ 0.46
SIX3-201ENST00000260653 HELZ2Q9BYK8 2649 aaKnown RBP17.89■□□□□ 0.46
SIX3-201ENST00000260653 CELSR1Q9NYQ6 3014 aa17.89■□□□□ 0.45
SIX3-201ENST00000260653 GNB1P62873 340 aa17.89■□□□□ 0.45
SIX3-201ENST00000260653 ERHP84090 104 aaKnown RBP17.89■□□□□ 0.45
SIX3-201ENST00000260653 CCDC144NLQ6NUI1 221 aa17.89■□□□□ 0.45
SIX3-201ENST00000260653 SNRNP70P08621 437 aaKnown RBP17.89■□□□□ 0.45
SIX3-201ENST00000260653 HES1Q14469 280 aa17.89■□□□□ 0.45
SIX3-201ENST00000260653 SPSB3Q6PJ21 355 aa17.89■□□□□ 0.45
SIX3-201ENST00000260653 DPPA3Q6W0C5 159 aa17.89■□□□□ 0.45
SIX3-201ENST00000260653 EAF1Q96JC9 268 aaPredicted RBP17.89■□□□□ 0.45
SIX3-201ENST00000260653 CSMD1Q96PZ7 3565 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 FCN1O00602 326 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 MOSP00540 346 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 OR13C7P0DN81 318 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 SAA4P35542 130 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 PAX8Q06710 450 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 PLGLAQ15195 96 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 CLEC12BQ2HXU8 276 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 AJUBAQ96IF1 538 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 TBL2Q9Y4P3 447 aaKnown RBP17.88■□□□□ 0.45
SIX3-201ENST00000260653 OOSP1A8MZH6 123 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 RPL27AP46776 148 aaKnown RBP17.88■□□□□ 0.45
SIX3-201ENST00000260653 COMPP49747 757 aaPredicted RBP17.88■□□□□ 0.45
SIX3-201ENST00000260653 RAB2AP61019 212 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 CCL20P78556 96 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 SSBP2P81877 361 aaPredicted RBP17.88■□□□□ 0.45
SIX3-201ENST00000260653 ZNF726P1Q15940 193 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 TMEM41BQ5BJD5 291 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 ZNF709Q8N972 641 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 SFT2D1Q8WV19 159 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 C1orf159Q96HA4 380 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 SAV1Q9H4B6 383 aaPredicted RBP17.88■□□□□ 0.45
SIX3-201ENST00000260653 TREM1Q9NP99 234 aa17.88■□□□□ 0.45
SIX3-201ENST00000260653 REG1AP05451 166 aa17.87■□□□□ 0.45
SIX3-201ENST00000260653 DSCR9P59020 149 aa17.87■□□□□ 0.45
SIX3-201ENST00000260653 SSX7Q7RTT5 188 aa17.87■□□□□ 0.45
SIX3-201ENST00000260653 NBPF19A0A087WUL8 3843 aa17.87■□□□□ 0.45
SIX3-201ENST00000260653 IGLC7A0M8Q6 106 aa17.87■□□□□ 0.45
SIX3-201ENST00000260653 NBR2O15453 112 aa17.87■□□□□ 0.45
SIX3-201ENST00000260653 APELAP0DMC3 54 aa17.87■□□□□ 0.45
SIX3-201ENST00000260653 ATP5IP56385 69 aaPredicted RBP17.86■□□□□ 0.45
SIX3-201ENST00000260653 FFAR4Q5NUL3 377 aa17.86■□□□□ 0.45
SIX3-201ENST00000260653 CFAP161Q6P656 301 aa17.86■□□□□ 0.45
SIX3-201ENST00000260653 PIP4P2Q8N4L2 257 aa17.86■□□□□ 0.45
SIX3-201ENST00000260653 RCC1LQ96I51 464 aaKnown RBP17.86■□□□□ 0.45
SIX3-201ENST00000260653 MGST2Q99735 147 aa17.86■□□□□ 0.45
SIX3-201ENST00000260653 CENPVL3A0A0U1RRI6 287 aa17.86■□□□□ 0.45
SIX3-201ENST00000260653 C17orf112F2Z3M2 114 aa17.86■□□□□ 0.45
SIX3-201ENST00000260653 MAS1LP35410 378 aa17.86■□□□□ 0.45
SIX3-201ENST00000260653 RPL35P42766 123 aaKnown RBP17.86■□□□□ 0.45
SIX3-201ENST00000260653 NPVFQ9HCQ7 196 aa17.86■□□□□ 0.45
SIX3-201ENST00000260653 LSM4Q9Y4Z0 139 aaKnown RBP17.86■□□□□ 0.45
SIX3-201ENST00000260653 ABCA1O95477 2261 aa17.85■□□□□ 0.45
SIX3-201ENST00000260653 J3QKU1 62 aa17.85■□□□□ 0.45
SIX3-201ENST00000260653 EIF3GO75821 320 aaKnown RBP eCLIP17.85■□□□□ 0.45
SIX3-201ENST00000260653 MLANAQ16655 118 aa17.85■□□□□ 0.45
SIX3-201ENST00000260653 RPP25LQ8N5L8 163 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms