RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Rbpms2Q8VC52 206 aaKnown RBP12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr1392Q8VFA6 311 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr916Q8VG53 310 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr1118A0A0J9YUE7 307 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Igkv12-44A0A140T8M2 115 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Aadacl3A2A7Z8 408 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Siva1O54926 175 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Ptbp1P17225 527 aaKnown RBP12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Cks1brtQ3UNC9 96 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Rln3Q8CHK2 141 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 FibinQ9CQS3 217 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 SdhcQ9CZB0 169 aaKnown RBP12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Mpdu1Q9R0Q9 247 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Hist1h1eP43274 219 aaKnown RBP12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Hist1h2baP70696 127 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Rab42Q0PD08 215 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr495Q8VF12 330 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Cotl1Q9CQI6 142 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Defb5Q9EPV9 64 aa12.92□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Platr25A0A1Y7VIZ1 466 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Klri1B2KG20 248 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 AhsgP29699 345 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr874Q7TRE6 310 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Asphd2Q80VP9 343 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Mdp1Q9D967 164 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Znf106O88466 1888 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Gm15293D3YX02 93 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr218E9PWV2 313 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Rdh16O54909 317 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Nudt10P0C027 164 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Nudt11P0C028 164 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 GferP56213 198 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 CebpdQ00322 268 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Znf511Q6P0X2 227 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Q6PIU9 354 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Wdyhv1Q80WB5 209 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 D330020A13RikQ8C799 211 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Rab11fip5Q8R361 645 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Greb1lB9EJV3 1913 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Igkv10-95A0A0G2JFY3 115 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Gm21731A0A286YDE9 180 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Syngr2O55101 224 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Spam1P48794 512 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Gpank1Q61858 372 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr876Q7TRE4 310 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Klf17Q8CFA7 341 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Lims1Q99JW4 325 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Wnt1P04426 370 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Phxr1P15973 60 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Rplp1P47955 114 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Ldlrad2Q3V0V0 142 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Obp2aQ8K1H9 176 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 1700008P02RikQ9DAJ8 175 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Tnfrsf19Q9JLL3 416 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Nubp1Q9R060 320 aa12.91□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Igkv12-38A0A0G2JEI7 115 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Hoxb2P0C1T1 354 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Mettl4Q3U034 471 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Hamp2Q80T19 83 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Dok5Q91ZM9 306 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Pxmp4Q9JJW0 212 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Pusl1A2ADA5 291 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Obp2bA2BHR0 176 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Rpl30P62889 115 aaKnown RBP12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 ShbgP97497 403 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Klhdc2Q4G5Y1 406 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Klk1b21Q61759 261 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Col11a2Q64739 1736 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Fcrl1Q8R4Y0 343 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Flywch2Q9CQE9 139 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Adh4Q9QYY9 377 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Ighv7-1A0A075B5S2 121 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Trbv5A0A0B4J1G9 113 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Gm765B2RVL9 189 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 P01667 111 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Defb46Q4QY34 57 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Pitpnc1Q8K4R4 332 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Rcc1Q8VE37 421 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 B4galt1P15535 399 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Cldn18P56857 264 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr1370Q8VFG4 316 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr822Q8VFU1 312 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr483Q8VG05 315 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Olfr1230Q8VG58 305 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 DapQ91XC8 102 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Tmem50bQ9D1X9 158 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Ssmem1Q9D9Y8 244 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Tmem196V9GX04 182 aa12.9□□□□□ -0.34
Pcdh20-201ENSMUST00000061628 Tp53bp1P70399 1969 aa12.9□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Trav13d-3J3QMG8 112 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gm5225J3QPL3 108 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 P06323 132 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 ClcP97400 68 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Eaf1Q9D4C5 268 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Mrpl30Q9D7N6 160 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 TslpQ9JIE6 140 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Fbxl17Q9QZN1 701 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Olfr1335B2RVY8 335 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 Gfi1bO70237 330 aa12.89□□□□□ -0.35
Pcdh20-201ENSMUST00000061628 ApelaP0DMC4 54 aa12.89□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms