RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Pfdn5Q9WU28 154 aa8.37□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 SpegQ62407 3262 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Myo9bQ9QY06 2114 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr902E9Q6Z7 309 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm10638F6QEG2 257 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Vmn1r128L7N2B4 307 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Kcns2O35174 477 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Cd46O88174 365 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Foxh1O88621 401 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 H2-LP01897 362 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Hist1h2bmP10854 126 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Chrna7P49582 502 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Fgf12P61329 243 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Isoc2aP85094 206 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Mbd6Q3TY92 1003 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm9Q3UKW5 162 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 CybaQ61462 192 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tle4Q62441 773 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Hist1h2bhQ64478 126 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Hist2h2bbQ64525 126 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Hist1h2bcQ6ZWY9 126 aaKnown RBP8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1396Q7TQS8 315 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Rnf170Q8CBG9 286 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Osbpl11Q8CI95 751 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Ccdc54Q9DAL3 329 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Rhox7aA2A4F1 281 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1124A2AT86 318 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm10665K7N6B7 321 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Ifna7P06799 190 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Hoxa5P09021 270 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Rps16P14131 146 aaKnown RBP8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tppp2Q0P5Y3 170 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Zfp7Q3TFZ4 685 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Slc25a35Q5SWT3 300 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Mindy2Q6PDI6 601 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Dcaf12Q8BGZ3 453 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Scgb2b27Q8R1E9 112 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 SpartQ8R1X6 671 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Ighv7-1A0A075B5S2 121 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Vmn1r160E9Q346 307 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1471F6QVZ8 314 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Heatr1G3X9B1 2143 aaKnown RBP8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Vmn1r123L7N270 307 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr224M9MMJ7 314 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 TectbO08524 329 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tpsb2P21845 276 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Hist1h1aP43275 213 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Zfp677Q6PEP4 634 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr112Q8C0S2 320 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1030Q8VFL5 318 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr206Q8VGP9 306 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Sgms2Q9D4B1 365 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1264Q9R0K2 308 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Trex2Q9R1A9 236 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm3550W4VSN7 160 aa8.36□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 A0A1Y7VLU2 103 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Rsg1A2A825 258 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Vmn1r167G3UW71 315 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Cdx1P18111 268 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Hhipl1Q14DK5 791 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 PilraQ2YFS3 302 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm20816Q5FWD4 227 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Cd55bQ61476 407 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Vstm2lQ6PDS0 220 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 ErasQ7TN89 227 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Zfp729bQ80VN4 1045 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 RydenQ8CAK3 290 aaKnown RBP8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 B4galt7Q8R087 327 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 RhovQ8VDU1 236 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr1155Q8VFR3 314 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gkn3Q9D0T7 191 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Rnase6Q9D244 153 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 ApooQ9DCZ4 198 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Igkv13-85A0A075B666 115 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Mrgpra9A0A140T8U8 332 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 CrpP14847 225 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tnfsf10P50592 291 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Slc7a10P63115 530 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm1527Q3V0P3 650 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 AbraclQ4KML4 81 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr328Q5NCD3 310 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Nmes1Q810Q5 83 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Foxn4Q8K3Q3 521 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr469Q8VF66 314 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 RTRAFQ9CQE8 244 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm19410A0A140LJC7 2098 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Spta1P08032 2415 aa8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tet1Q3URK3 2007 aaKnown RBP8.35□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 SellP18337 372 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tbrg1Q3UB74 406 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Prdm6Q3UZD5 596 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 C1ql4Q4ZJM9 238 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Aqp11Q8BHH1 271 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Pla2g16Q8R3U1 162 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Olfr803Q8VFI3 308 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Chrdl1Q920C1 447 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Cbln3Q9JHG0 197 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Gm39566A0A1B0GT45 1251 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 4930444P10RikD3YUR1 185 aa8.34□□□□□ -1.07
Ccdc40-202ENSMUST00000053440 Tcstv1O70619 171 aa8.34□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms