RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 RPL31P62899 125 aaKnown RBP10.37□□□□□ -0.75
CAPN1-208ENST00000527323 PAFAH1B2P68402 229 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 GABRA6Q16445 453 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 Q6ZWC4 215 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 MDS2Q8NDY4 140 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 OR1L6Q8NGR2 347 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 KLF14Q8TD94 323 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-208ENST00000527323 TMEM68Q96MH6 324 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 FAM103A1Q9BTL3 118 aaKnown RBP10.37□□□□□ -0.75
CAPN1-208ENST00000527323 DCHS2Q6V1P9 2916 aa10.37□□□□□ -0.75
CAPN1-208ENST00000527323 YPEL3P61236 119 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-208ENST00000527323 HTD2P86397 168 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 HLA-DRB5Q30154 266 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 OR5AU1Q8NGC0 362 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 MGST2Q99735 147 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 TXNDC17Q9BRA2 123 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 A6NNC1 897 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 IQCF6A8MYZ5 107 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 KLRC4-KLRK1H3BQV0 150 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 FABP6P51161 128 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 ACP7Q6ZNF0 438 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 GGTLC1Q9BX51 225 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 YTHDF2Q9Y5A9 579 aaKnown RBP10.36□□□□□ -0.75
CAPN1-208ENST00000527323 IGSF10Q6WRI0 2623 aa10.36□□□□□ -0.75
CAPN1-208ENST00000527323 TIMM8AO60220 97 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-208ENST00000527323 RPLP1P05386 114 aaKnown RBP10.35□□□□□ -0.75
CAPN1-208ENST00000527323 PF4V1P10720 104 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 RANP62826 216 aaKnown RBP10.35□□□□□ -0.75
CAPN1-208ENST00000527323 UHRF2Q96PU4 802 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 VAMP8Q9BV40 100 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 HINT2Q9BX68 163 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 IL36BQ9NZH7 164 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 SNURFLB1AK76 121 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 M0QZK8 103 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 GCHFRP30047 84 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 TMEM249Q2WGJ8 235 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 CNEP1R1Q8N9A8 125 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 TRAV3A0A0B4J244 114 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 ACTL6BO94805 426 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 AGFG2O95081 481 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 MT-CO2P00403 227 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 IRF2P14316 349 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 COL8A2P25067 703 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 DUTP33316 252 aaKnown RBP10.35□□□□□ -0.75
CAPN1-208ENST00000527323 CDKN1AP38936 164 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 SPATA31B1PQ5VZV4 182 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 OR4P4Q8NGL7 312 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 CXXC4Q9H2H0 198 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 HES4Q9HCC6 221 aa10.35□□□□□ -0.75
CAPN1-208ENST00000527323 KLF13Q9Y2Y9 288 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-208ENST00000527323 TRGV5A0A0B4J1U4 118 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 J3QW42 95 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 FOXH1O75593 365 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 KRTDAPP60985 99 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 OR5I1Q13606 314 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 TMEM183BQ1AE95 376 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 KRTCAP3Q53RY4 240 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 C11orf53Q8IXP5 236 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 WDR31Q8NA23 367 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 TRIB1Q96RU8 372 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 MIEN1Q9BRT3 115 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 NPVFQ9HCQ7 196 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 SEPSECSQ9HD40 501 aaKnown RBP10.34□□□□□ -0.75
CAPN1-208ENST00000527323 TP53TG3Q9ULZ0 132 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 SPG11Q96JI7 2443 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 TNFSF13O75888 250 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 ADH4P08319 380 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 IL6RP08887 468 aaPredicted RBP10.34□□□□□ -0.75
CAPN1-208ENST00000527323 FRMD6-AS1P0C7T7 363 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 RHOBP62745 196 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 RAB31Q13636 194 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 RPEL1Q2QD12 228 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 RPL39P5Q59GN2 51 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 SIGLECL1Q8N7X8 197 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 S1PR3Q99500 378 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 MED13LQ71F56 2210 aa10.34□□□□□ -0.75
CAPN1-208ENST00000527323 ZNF891A8MT65 544 aaPredicted RBP10.33□□□□□ -0.76
CAPN1-208ENST00000527323 F2Z2F3 143 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 K7EN84 100 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 IGHV1-2P23083 117 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 SMIM21Q3B7S5 101 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 WDR82Q6UXN9 313 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 MMD2Q8IY49 270 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 OR8I2Q8N0Y5 310 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 GOLT1BQ9Y3E0 138 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 HOXC12P31275 282 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 SELENOTP62341 195 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 TMEM208Q9BTX3 173 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 ENY2Q9NPA8 101 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 NAT8BQ9UHF3 227 aa10.33□□□□□ -0.76
CAPN1-208ENST00000527323 PROP1O75360 226 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 SLC35B1P78383 322 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 EFNB3Q15768 340 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 KIAA1644Q3SXP7 199 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 TPTE2P1Q5T6R2 138 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 STPG3Q8N7X2 389 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 LRRC29Q8WV35 223 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 TCF19Q9Y242 345 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 HIVEP3Q5T1R4 2406 aa10.32□□□□□ -0.76
CAPN1-208ENST00000527323 USP24Q9UPU5 2620 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms