RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 PFDN1O60925 122 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 IFNA7P01567 189 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 RPS4Y1P22090 263 aaKnown RBP3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 ATP6V0CP27449 155 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 BLVRBP30043 206 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 SRP9P49458 86 aaKnown RBP3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 GTF2A1P52655 376 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 WNT4P56705 351 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 CDC42P60953 191 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 FKBP1AP62942 108 aaKnown RBP3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 C10orf91Q5T1B1 145 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 AMTNQ6UX39 209 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 SSX8Q7RTT4 187 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 TMEM105Q8N8V8 129 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 THEM6Q8WUY1 208 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 UBE2WQ96B02 151 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 MALSU1Q96EH3 234 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 TMEM70Q9BUB7 260 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 CCDC32Q9BV29 185 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 OR5V1Q9UGF6 321 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 KLK5Q9Y337 293 aaPredicted RBP3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 U3KQK5 164 aa3.59□□□□□ -1.83
CTNNA1-202ENST00000517533 PRG4Q92954 1404 aaPredicted RBP3.59□□□□□ -1.84
CTNNA1-202ENST00000517533 FYCO1Q9BQS8 1478 aa3.59□□□□□ -1.84
CTNNA1-202ENST00000517533 SVILO95425 2214 aa3.59□□□□□ -1.84
CTNNA1-202ENST00000517533 SAMD9Q5K651 1589 aa3.59□□□□□ -1.84
CTNNA1-202ENST00000517533 DOCK8Q8NF50 2099 aa3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 RPS3P23396 243 aaKnown RBP eCLIP3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 CKS1BP61024 79 aa3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 RPL30P62888 115 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 SPCS2Q15005 226 aa3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 ZNF709Q8N972 641 aa3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 OR10D4PQ8NGN7 298 aa3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 H1FXQ92522 213 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 HIST1H2BAQ96A08 127 aa3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 CAPZA3Q96KX2 299 aa3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 PFDN5Q99471 154 aa3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 PTPRGP23470 1445 aa3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 CROCCQ5TZA2 2017 aa3.58□□□□□ -1.84
CTNNA1-202ENST00000517533 A0A087WUU8 490 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 A0A0B4J2C4 111 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 TMEM269A0A1B0GVZ9 245 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 TRAPPC2LH3BP13 241 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 J3QRK9 145 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 SLC25A20O43772 301 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 KIF1BO60333 1816 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 SH2D1AO60880 128 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 OR2J2O76002 312 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 CCL3P10147 92 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 GPX2P18283 190 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 NPPCP23582 126 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 ZNF80P51504 273 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 AP1S1P61966 158 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 RPS11P62280 158 aaKnown RBP eCLIP3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 CCDC18Q5T9S5 1454 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 C16orf47Q6ZP98 133 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 TMEM86AQ8N2M4 240 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 OR4D11Q8NGI4 311 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 DISP1Q96F81 1524 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 CARD19Q96LW7 228 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 HSPB9Q9BQS6 159 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 TM2D3Q9BRN9 247 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 UPK3BQ9BT76 320 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 C11orf1Q9H5F2 150 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 SPANXA1Q9NS26 97 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 PCTPQ9UKL6 214 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 SNX12Q9UMY4 172 aa3.57□□□□□ -1.84
CTNNA1-202ENST00000517533 TICRRQ7Z2Z1 1910 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 RALGAPA2Q2PPJ7 1873 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 KIAA0556O60303 1618 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 LRRC9Q6ZRR7 1453 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 NID2Q14112 1375 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 TONSLQ96HA7 1378 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 PTPRJQ12913 1337 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 ARL5CA6NH57 179 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 DEGS1O15121 323 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 ZNF73O43830 326 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 APOA2P02652 100 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 IGHV3-30-3P0DP02 117 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 GABRA2P47869 451 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 OR8B8Q15620 311 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 AADACL3Q5VUY0 350 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 ZFAND6Q6FIF0 208 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 OR9Q1Q8NGQ5 310 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 OR5C1Q8NGR4 320 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 TTTY13Q9BZ97 58 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 FUT9Q9Y231 359 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 DSCAML1Q8TD84 2053 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 TRIP11Q15643 1979 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 CHD1O14646 1710 aa3.56□□□□□ -1.84
CTNNA1-202ENST00000517533 TIAM1Q13009 1591 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 ARHGAP21Q5T5U3 1957 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 IGLV4-69A0A075B6H9 119 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 TRBV24-1A0A075B6N3 115 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 UBE2L6O14933 153 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 HIST1H2BOP23527 126 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 HIST1H2BBP33778 126 aa3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 POLR2HP52434 150 aaKnown RBP3.55□□□□□ -1.84
CTNNA1-202ENST00000517533 AKR1C2P52895 323 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms