RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 ZNF114Q8NC26 417 aa10.67□□□□□ -0.7
LMNA-220ENST00000504687 SH3BGRL3Q9H299 93 aa10.67□□□□□ -0.7
LMNA-220ENST00000504687 WDR83OSQ9Y284 106 aa10.67□□□□□ -0.7
LMNA-220ENST00000504687 UTP20O75691 2785 aaKnown RBP10.67□□□□□ -0.7
LMNA-220ENST00000504687 ARHGAP32A7KAX9 2087 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 A0A096LNT2 108 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 BTBD17A6NE02 478 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 CGB1A6NKQ9 187 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 RRHO14718 337 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 SLC25A17O43808 307 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 TSPAN9O75954 239 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 MOSP00540 346 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 COMPP49747 757 aaPredicted RBP10.66□□□□□ -0.7
LMNA-220ENST00000504687 LGALS4P56470 323 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 ERHP84090 104 aaKnown RBP10.66□□□□□ -0.7
LMNA-220ENST00000504687 PJVKQ0ZLH3 352 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 SPINK9Q5DT21 86 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 PPP1R27Q86WC6 154 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 OR2T10Q8NGZ9 312 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 PERPQ96FX8 193 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 AJUBAQ96IF1 538 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 RITA1Q96K30 269 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 CITED4Q96RK1 184 aa10.66□□□□□ -0.7
LMNA-220ENST00000504687 DCHS2Q6V1P9 2916 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 TRAV1-1A0A0B4J248 108 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 B4DSR2 109 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 TEX46H3BTG2 121 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 CA2P00918 260 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 RNASE2P10153 161 aaKnown RBP10.65□□□□□ -0.7
LMNA-220ENST00000504687 CLEC12BQ2HXU8 276 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 SLC25A24Q6NUK1 477 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 PRSS57Q6UWY2 283 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 Q6ZRG5 221 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 LHFPL4Q7Z7J7 247 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 LFNGQ8NES3 379 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 RNASEH2CQ8TDP1 164 aaKnown RBP10.65□□□□□ -0.7
LMNA-220ENST00000504687 CACNG8Q8WXS5 425 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.7
LMNA-220ENST00000504687 PTPN13Q12923 2485 aa10.65□□□□□ -0.7
LMNA-220ENST00000504687 IGHV3-72A0A0B4J1Y9 119 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 TRAV20A0A0B4J274 112 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 A0A1B0GW64 132 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 KRBOX1C9JBD0 128 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 NBR2O15453 112 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 MBP02144 154 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 MSMBP08118 114 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 SNRNP70P08621 437 aaKnown RBP10.64□□□□□ -0.71
LMNA-220ENST00000504687 GPX4P36969 197 aaPredicted RBP10.64□□□□□ -0.71
LMNA-220ENST00000504687 CAMLGP49069 296 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 SUB1P53999 127 aaKnown RBP eCLIP10.64□□□□□ -0.71
LMNA-220ENST00000504687 RUNX1Q01196 453 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 LOXL1Q08397 574 aaPredicted RBP10.64□□□□□ -0.71
LMNA-220ENST00000504687 AKR1C8PQ5T2L2 129 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 TMEM182Q6ZP80 229 aaPredicted RBP10.64□□□□□ -0.71
LMNA-220ENST00000504687 EAF1Q96JC9 268 aaPredicted RBP10.64□□□□□ -0.71
LMNA-220ENST00000504687 NPVFQ9HCQ7 196 aa10.64□□□□□ -0.71
LMNA-220ENST00000504687 METTL1Q9UBP6 276 aaKnown RBP10.64□□□□□ -0.71
LMNA-220ENST00000504687 CENPVL3A0A0U1RRI6 287 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 UBE2L5PA0A1B0GUS4 154 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 IGLC7A0M8Q6 106 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 C17orf112F2Z3M2 114 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 NPFFO15130 113 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 IFNA4P05014 189 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 MYOD1P15172 320 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 BRS3P32247 399 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 SNCAP37840 140 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 RPL27AP46776 148 aaKnown RBP10.63□□□□□ -0.71
LMNA-220ENST00000504687 PRB3Q04118 309 aaPredicted RBP10.63□□□□□ -0.71
LMNA-220ENST00000504687 PMS2P11Q13670 270 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 DEFB113Q30KQ7 82 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 MBD3L1Q8WWY6 194 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 NPCDR1Q9BY65 106 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 SMDT1Q9H4I9 107 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 KCNIP2Q9NS61 270 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 FBXO7Q9Y3I1 522 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 HILPDAQ9Y5L2 63 aa10.63□□□□□ -0.71
LMNA-220ENST00000504687 TNCP24821 2201 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 E7EUB6 86 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 ACTL6BO94805 426 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 IGKV1D-33P01593 117 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 IGKV1-33P01594 117 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 HBE1P02100 147 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 PRH1P02810 166 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 ZP3P21754 424 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 SAA4P35542 130 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 WT1-ASQ06250 92 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 SSX2Q16385 188 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 TMEM41BQ5BJD5 291 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 TREML4Q6UXN2 200 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 DYNAPQ8N1N2 210 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 RSG1Q9BU20 258 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 TPSG1Q9NRR2 321 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 KIAA1456Q9P272 454 aa10.62□□□□□ -0.71
LMNA-220ENST00000504687 ABCA2Q9BZC7 2435 aa10.61□□□□□ -0.71
LMNA-220ENST00000504687 IGHV1-69DA0A0B4J2H0 117 aa10.61□□□□□ -0.71
LMNA-220ENST00000504687 I3L521 148 aa10.61□□□□□ -0.71
LMNA-220ENST00000504687 J3QLI3 93 aa10.61□□□□□ -0.71
LMNA-220ENST00000504687 CORTO00230 105 aa10.61□□□□□ -0.71
LMNA-220ENST00000504687 IGHV1-69P01742 117 aa10.61□□□□□ -0.71
LMNA-220ENST00000504687 CD5P06127 495 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms