RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 SHISA8B8ZZ34 492 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 LINC01619G3V211 115 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.96□□□□□ -1.78
PRKD3-210ENST00000494667 CLDN1O95832 211 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 P04436 131 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 LGALS9BQ3B8N2 356 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 TIGITQ495A1 244 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 LGALS9CQ6DKI2 356 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 TREML4Q6UXN2 200 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 OOSP2Q86WS3 158 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 AP1S3Q96PC3 154 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 MGST2Q99735 147 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 PRO0461Q9UI25 63 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 TNFRSF18Q9Y5U5 241 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 SHANK1Q9Y566 2161 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 C2orf16Q68DN1 1984 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 EML6Q6ZMW3 1958 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 A0A087X0K7 114 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 hDV102S1A0JD36 115 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 E9PLD3 99 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 LEPROTL1O95214 131 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 YPEL5P62699 121 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 PMP22Q01453 160 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 WIPI1Q5MNZ9 446 aaPredicted RBP3.96□□□□□ -1.78
PRKD3-210ENST00000494667 IBA57Q5T440 356 aaKnown RBP3.96□□□□□ -1.78
PRKD3-210ENST00000494667 C1QTNF5Q9BXJ0 243 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 GTSF1LQ9H1H1 148 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 DEC1Q9P2X7 70 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 TSSC4Q9Y5U2 329 aaPredicted RBP3.96□□□□□ -1.78
PRKD3-210ENST00000494667 ADAMTS20P59510 1910 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 C19orf67A6NJJ6 358 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 SMAD7O15105 426 aaKnown RBP3.96□□□□□ -1.78
PRKD3-210ENST00000494667 HMGB3O15347 200 aaKnown RBP3.96□□□□□ -1.78
PRKD3-210ENST00000494667 DNPH1O43598 174 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 PVRP15151 417 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 NTF3P20783 257 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 SMAGPQ0VAQ4 97 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 LTC4SQ16873 150 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 PRR22Q8IZ63 422 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 FADS6Q8N9I5 356 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 EMC6Q9BV81 110 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 CRIM1Q9NZV1 1036 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF492Q9P255 531 aa3.96□□□□□ -1.78
PRKD3-210ENST00000494667 PTPRBP23467 1997 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 TMEM150CB9EJG8 249 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 H3BUT2 72 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 K7EQM0 130 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 NXPH3O95157 252 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 IGHV3-7P01780 117 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 VDAC2P45880 294 aaPredicted RBP3.95□□□□□ -1.78
PRKD3-210ENST00000494667 EFNB3Q15768 340 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 KIAA1644Q3SXP7 199 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 FAM214BQ7L5A3 538 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF611Q8N823 705 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 SMRP1Q8NCR6 262 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 TSACCQ96A04 125 aaPredicted RBP3.95□□□□□ -1.78
PRKD3-210ENST00000494667 THYN1Q9P016 225 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 PSG8Q9UQ74 426 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 ARHGAP21Q5T5U3 1957 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 LINC01546A6NGU7 62 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 PRR33A8MZF0 331 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 CCL2P13500 99 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 COL9A1P20849 921 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 ATP5IP56385 69 aaPredicted RBP3.95□□□□□ -1.78
PRKD3-210ENST00000494667 CR1LQ2VPA4 569 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 Q5PR19 223 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 PARM1Q6UWI2 310 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 MKXQ8IYA7 352 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 TMEM251Q8N6I4 163 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 NUP35Q8NFH5 326 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 GALMQ96C23 342 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 TM2D2Q9BX73 214 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 PRSS22Q9GZN4 317 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 OR1A1Q9P1Q5 309 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 A0A1B0GWB2 263 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 A0A1W2PRD5 423 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 A0A1W2PRF3 423 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 A0A1W2PRM7 423 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 SRRM4A7MD48 611 aaKnown RBP3.95□□□□□ -1.78
PRKD3-210ENST00000494667 M0QXV9 152 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 IGHG3P01860 377 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 ADH4P08319 380 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 TCL1AP56279 114 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 HHEXQ03014 270 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 TAL2Q16559 108 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 DHRS13Q6UX07 377 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 ZNF497Q6ZNH5 498 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 PQLC2Q6ZP29 291 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 PIP4P1Q86T03 277 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 DRAM1Q8N682 238 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 OR2T6Q8NHC8 308 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 PKIBQ9C010 78 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 HRASLS2Q9NWW9 162 aa3.95□□□□□ -1.78
PRKD3-210ENST00000494667 A0A1W2PQU0 124 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 OVOL3O00110 214 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 DKK1O94907 266 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 DUTP33316 252 aaKnown RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 FOXA3P55318 350 aaPredicted RBP3.94□□□□□ -1.78
PRKD3-210ENST00000494667 SAMD5Q5TGI4 173 aa3.94□□□□□ -1.78
PRKD3-210ENST00000494667 BADQ92934 168 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms