RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ZFYVE26Q68DK2 2539 aa5.68□□□□□ -1.5
SF3A3-206ENST00000487062 USP9XQ93008 2570 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-206ENST00000487062 EPG5Q9HCE0 2579 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 A0A1W2PRD5 423 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 A0A1W2PRF3 423 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 A0A1W2PRM7 423 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 PMS2P5A8MQ11 134 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 B4DSR2 109 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 C17orf112F2Z3M2 114 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 INS-IGF2F8WCM5 200 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 TRIM77I1YAP6 450 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 VENTXO95231 258 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 MOSP00540 346 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 PRH1P02810 166 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 IFNA4P05014 189 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 FAM157CP0CG43 387 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 GATA3P23771 443 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 COL8A1P27658 744 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 BRS3P32247 399 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 CAMLGP49069 296 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 SUB1P53999 127 aaKnown RBP eCLIP5.67□□□□□ -1.51e-13■■■■□ 24.4
SF3A3-206ENST00000487062 DLK1P80370 383 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 SERF2P84101 59 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 PAX8Q06710 450 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 ARL16Q0P5N6 197 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 HES1Q14469 280 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 HABP2Q14520 560 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-206ENST00000487062 PLGLAQ15195 96 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 PSG5Q15238 335 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 SSX2Q16385 188 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 LRRC75BQ2VPJ9 315 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 AKR1C8PQ5T2L2 129 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 ETV3LQ6ZN32 361 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 TMEM182Q6ZP80 229 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-206ENST00000487062 LHFPL4Q7Z7J7 247 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 HAPLN4Q86UW8 402 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 OR2T10Q8NGZ9 312 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 SUN5Q8TC36 379 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 CFHR4Q92496 578 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 NRGNQ92686 78 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 TAF15Q92804 592 aaKnown RBP eCLIP5.67□□□□□ -1.5
SF3A3-206ENST00000487062 CXorf58Q96LI9 332 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 PSMG3-AS1Q96PY0 264 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 PSMG3Q9BT73 122 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-206ENST00000487062 GGACTQ9BVM4 153 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 WDR61Q9GZS3 305 aaKnown RBP5.67□□□□□ -1.5
SF3A3-206ENST00000487062 ZNF430Q9H8G1 570 aaPredicted RBP5.67□□□□□ -1.5
SF3A3-206ENST00000487062 PARP11Q9NR21 331 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 NDUFA4L2Q9NRX3 87 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 METTL1Q9UBP6 276 aaKnown RBP5.67□□□□□ -1.5
SF3A3-206ENST00000487062 TIMM9Q9Y5J7 89 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 RELNP78509 3460 aa5.67□□□□□ -1.5
SF3A3-206ENST00000487062 UBE2L5PA0A1B0GUS4 154 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 FNDC10F2Z333 226 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 RRHO14718 337 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 NPFFO15130 113 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 NBR2O15453 112 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 SOX15O60248 233 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 MPDU1O75352 247 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 TSPAN9O75954 239 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 IGKV1D-33P01593 117 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 IGKV1-33P01594 117 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 OPN1MWP04001 364 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 CRYGBP07316 175 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 MSMBP08118 114 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 SNRNP70P08621 437 aaKnown RBP5.66□□□□□ -1.5
SF3A3-206ENST00000487062 OPN1MW2P0DN77 364 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 OPN1MW3P0DN78 364 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 FGF7P21781 194 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 RPL27AP46776 148 aaKnown RBP5.66□□□□□ -1.5
SF3A3-206ENST00000487062 MMDQ15546 238 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 TNXAQ16473 311 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 PRSS8Q16651 343 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 VWC2Q2TAL6 325 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 DEFB113Q30KQ7 82 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 C2orf83Q53S99 150 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 DPPA3Q6W0C5 159 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 IL34Q6ZMJ4 242 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 Q6ZRG5 221 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 HSD17B13Q7Z5P4 300 aaPredicted RBP5.66□□□□□ -1.5
SF3A3-206ENST00000487062 PPP1R27Q86WC6 154 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 CCDC28AQ8IWP9 274 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 ZNF709Q8N972 641 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 SH3BGRL3Q9H299 93 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 SIGLEC9Q9Y336 463 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 FBXO7Q9Y3I1 522 aa5.66□□□□□ -1.5
SF3A3-206ENST00000487062 CENPVL3A0A0U1RRI6 287 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 SMCO3A2RU48 225 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 RAB19A4D1S5 217 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 TEX46H3BTG2 121 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 NDUFA3O95167 84 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 TSPAN15O95858 294 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 CA2P00918 260 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 MBP02144 154 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 FAM106CPP0CH98 169 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 RNASE2P10153 161 aaKnown RBP5.65□□□□□ -1.5
SF3A3-206ENST00000487062 MYOD1P15172 320 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 CNTFRP26992 372 aa5.65□□□□□ -1.5
SF3A3-206ENST00000487062 COMPP49747 757 aaPredicted RBP5.65□□□□□ -1.5
SF3A3-206ENST00000487062 RAB2AP61019 212 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms