RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 RPS25P62851 125 aaKnown RBP8.25□□□□□ -1.09
TTC28-206ENST00000480563 NEDD8Q15843 81 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 SSX1Q16384 188 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 TMEM91Q6ZNR0 172 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 MFSD4AQ8N468 514 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 TSPAN14Q8NG11 270 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 VN1R17PQ8TDU5 208 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 HSD17B10Q99714 261 aaKnown RBP8.25□□□□□ -1.09
TTC28-206ENST00000480563 SPATA2Q9UM82 520 aa8.25□□□□□ -1.09
TTC28-206ENST00000480563 IGLC7A0M8Q6 106 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 NDUFA4O00483 81 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 PDCD5O14737 125 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 RTL8CO15255 209 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 CA1P00915 261 aaPredicted RBP8.24□□□□□ -1.09
TTC28-206ENST00000480563 HIST1H1DP16402 221 aaKnown RBP8.24□□□□□ -1.09
TTC28-206ENST00000480563 CALRP27797 417 aaKnown RBP8.24□□□□□ -1.09
TTC28-206ENST00000480563 TMEM187Q14656 261 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 HES5Q5TA89 166 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 NR2C2APQ86WQ0 139 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 BSCL2Q96G97 398 aaPredicted RBP8.24□□□□□ -1.09
TTC28-206ENST00000480563 RNF2Q99496 336 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 CHRDL1Q9BU40 450 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 HRH4Q9H3N8 390 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 HRASLSQ9HDD0 168 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 BET1LQ9NYM9 111 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 SMPXQ9UHP9 88 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 ETV7Q9Y603 341 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 V9GY05 133 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 DNAH2Q9P225 4427 aa8.24□□□□□ -1.09
TTC28-206ENST00000480563 IGHV4-4A0A075B6R2 117 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 IGKV1D-13A0A0B4J2D9 117 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 CYB5BO43169 146 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 CTXN2P0C2S0 81 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 IGKV1-13P0DP09 117 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 HLA-DMBP28068 263 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 EIF4EBP1Q13541 118 aaPredicted RBP8.23□□□□□ -1.09
TTC28-206ENST00000480563 TIMM50Q3ZCQ8 353 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 SPSB3Q6PJ21 355 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 GPHA2Q96T91 129 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 AIFM2Q9BRQ8 373 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 TAS2R8Q9NYW2 309 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 SSR3Q9UNL2 185 aa8.23□□□□□ -1.09
TTC28-206ENST00000480563 IGKV3-7A0A075B6H7 116 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 IGHV3-21A0A0B4J1V1 117 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 TRAV10A0A0B4J240 114 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 TRAV3A0A0B4J244 114 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 TRDV1A0A1B0GX56 115 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 C15orf62A8K5M9 175 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 M0R2N4 97 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 CHEK1O14757 476 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 DTYMKP23919 212 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 FABP5Q01469 135 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 SLC25A24Q6NUK1 477 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 ZNF66Q6ZN08 573 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 GBGT1Q8N5D6 347 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 Q8NAQ8 132 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 OR10W1Q8NGF6 305 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 SRSF8Q9BRL6 282 aaKnown RBP8.22□□□□□ -1.09
TTC28-206ENST00000480563 RHPN1-AS1Q9BWJ2 59 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 COMMD5Q9GZQ3 224 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 ELF5Q9UKW6 265 aaPredicted RBP8.22□□□□□ -1.09
TTC28-206ENST00000480563 DNAH11Q96DT5 4516 aa8.22□□□□□ -1.09
TTC28-206ENST00000480563 IGHV3-49A0A0A0MS15 119 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 IGHV4-28A0A0C4DH34 117 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 IGHV7-4-1A0A0J9YVY3 117 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 METTL21EPA6NDL7 271 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 UPK2O00526 184 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 RBMY1A1P0DJD3 496 aaKnown RBP8.21□□□□□ -1.1
TTC28-206ENST00000480563 RBMY1CP0DJD4 496 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 RBMY1FQ15415 496 aaKnown RBP8.21□□□□□ -1.1
TTC28-206ENST00000480563 PVRIGQ6DKI7 326 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 Q6ZTC4 211 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 SPAG16Q8N0X2 631 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 CENPSQ8N2Z9 138 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 POM121L12Q8N7R1 296 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 GDPD1Q8N9F7 314 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 UBAC2Q8NBM4 344 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 TMEM116Q8NCL8 245 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 SCARB1Q8WTV0 552 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 CMTM3Q96MX0 182 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 C21orf62Q9NYP8 219 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 PLA2G2EQ9NZK7 142 aa8.21□□□□□ -1.1
TTC28-206ENST00000480563 DYNC1H1Q14204 4646 aaKnown RBP8.2□□□□□ -1.1
TTC28-206ENST00000480563 TRAV1-2A0A0B4J238 106 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 C15orf61A6NNL5 157 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 F8W735 103 aaPredicted RBP8.2□□□□□ -1.1
TTC28-206ENST00000480563 TNFSF12O43508 249 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 SERPINE2P07093 398 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 OR13C7P0DN81 318 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 RAB6AP20340 208 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 ARL6IP1Q15041 203 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 CDNFQ49AH0 187 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 FAM90A2PQ658T7 463 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 C22orf42Q6IC83 251 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 CNIH2Q6PI25 160 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 ATP6V0BQ99437 205 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 RNF126Q9BV68 326 aa8.2□□□□□ -1.1
TTC28-206ENST00000480563 QTRT1Q9BXR0 403 aaKnown RBP8.2□□□□□ -1.1
TTC28-206ENST00000480563 MRPS26Q9BYN8 205 aaKnown RBP8.2□□□□□ -1.1
TTC28-206ENST00000480563 PKD1P98161 4303 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms