RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TMEM170AQ8WVE7 144 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 LHX4Q969G2 390 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 TMEM14BQ9NUH8 114 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 FOXA2Q9Y261 457 aaPredicted RBP11.78□□□□□ -0.52
COL5A1-205ENST00000464187 WDR83OSQ9Y284 106 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 IFNA1P01562 189 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 MT-ND4LP03901 98 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 CT45A6P0DMU7 189 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 CT45A5P0DMU8 189 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 CT45A7P0DMV0 189 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 ZFP36P26651 326 aaKnown RBP11.77□□□□□ -0.52
COL5A1-205ENST00000464187 RAB13P51153 203 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 LMO4P61968 165 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 RAB11AP62491 216 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 PMS2P11Q13670 270 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 ZNF709Q8N972 641 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 TVP23CQ96ET8 276 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 NIPSNAP3BQ9BS92 247 aa11.77□□□□□ -0.52
COL5A1-205ENST00000464187 C17orf112F2Z3M2 114 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 HMGB3O15347 200 aaKnown RBP11.76□□□□□ -0.53
COL5A1-205ENST00000464187 CD1BP29016 333 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 DLK1P80370 383 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 HABP2Q14520 560 aaPredicted RBP11.76□□□□□ -0.53
COL5A1-205ENST00000464187 ZFP82Q8N141 532 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 ABHD12Q8N2K0 398 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 YPEL4Q96NS1 127 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 SAV1Q9H4B6 383 aaPredicted RBP11.76□□□□□ -0.53
COL5A1-205ENST00000464187 ONECUT1Q9UBC0 465 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 VAX2Q9UIW0 290 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 IGHV4-30-2A0A087WSY4 118 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 A0A087X0M5 115 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 A0A1B0GX30 115 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 VWC2LB2RUY7 222 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 HRASP01112 189 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 TAGLN2P37802 199 aaKnown RBP11.76□□□□□ -0.53
COL5A1-205ENST00000464187 RNF212Q495C1 297 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 ZNF833PQ6ZTB9 187 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 SLC35E3Q7Z769 313 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 P2RX4Q99571 388 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 ACTR3CQ9C0K3 210 aaPredicted RBP11.76□□□□□ -0.53
COL5A1-205ENST00000464187 TMEM133Q9H2Q1 129 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 TMPRSS5Q9H3S3 457 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 SLC35D1Q9NTN3 355 aa11.76□□□□□ -0.53
COL5A1-205ENST00000464187 A0A087WWC5 75 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 hCG_1809904A0A1W2PP81 198 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 A0A1W2PR64 198 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 A0A1W2PRV1 198 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 SMCO3A2RU48 225 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 OR2C1O95371 312 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 RBP4P02753 201 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
COL5A1-205ENST00000464187 MYOD1P15172 320 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 DLX1P56177 255 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 HSPE1P61604 102 aaKnown RBP11.75□□□□□ -0.53
COL5A1-205ENST00000464187 ARF6P62330 175 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 LCN2P80188 198 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 FAM24BQ8N5W8 94 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 OR13D1Q8NGV5 346 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 C2CD4CQ8TF44 421 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 GGACTQ9BVM4 153 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 TNCP24821 2201 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 POLQO75417 2590 aa11.75□□□□□ -0.53
COL5A1-205ENST00000464187 IGHV4-61A0A0C4DH41 118 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 ZNF727A8MUV8 499 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 J3QR06 171 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 IGKV1-16P04430 117 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 DEFA4P12838 97 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 RTL8BQ17RB0 113 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 TREML4Q6UXN2 200 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 RAB24Q969Q5 203 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 SVEP1Q4LDE5 3571 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 ABCA12Q86UK0 2595 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 SRRM4A7MD48 611 aaKnown RBP11.74□□□□□ -0.53
COL5A1-205ENST00000464187 TSPAN9O75954 239 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 RAB5AP20339 215 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 MAS1LP35410 378 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 DSCR9P59020 149 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 CD81P60033 236 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 PRB3Q04118 309 aaPredicted RBP11.74□□□□□ -0.53
COL5A1-205ENST00000464187 ACOT6Q3I5F7 207 aaPredicted RBP11.74□□□□□ -0.53
COL5A1-205ENST00000464187 RBMS3Q6XE24 437 aaKnown RBP11.74□□□□□ -0.53
COL5A1-205ENST00000464187 C8orf31Q8N9H6 132 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 OR9G1Q8NH87 305 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 MGST2Q99735 147 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 MRPL20Q9BYC9 149 aaKnown RBP11.74□□□□□ -0.53
COL5A1-205ENST00000464187 OR51B2Q9Y5P1 312 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 CSMD1Q96PZ7 3565 aa11.74□□□□□ -0.53
COL5A1-205ENST00000464187 MED13LQ71F56 2210 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 SEC14L6B5MCN3 397 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 M0R1W7 72 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 UPK2O00526 184 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 ENSAO43768 121 aaKnown RBP11.73□□□□□ -0.53
COL5A1-205ENST00000464187 MPDU1O75352 247 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 NPY1RP25929 384 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 CDC34P49427 236 aaPredicted RBP11.73□□□□□ -0.53
COL5A1-205ENST00000464187 RAB5BP61020 215 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 CLEC12BQ2HXU8 276 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 GCSAMLQ5JQS6 135 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 SLC24A4Q8NFF2 622 aa11.73□□□□□ -0.53
COL5A1-205ENST00000464187 OR10X1Q8NGY0 326 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms