RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 CD5LO43866 347 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 COX7A1P24310 79 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 NPY1RP25929 384 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 RPL27AP46776 148 aaKnown RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 HOXA1P49639 335 aaPredicted RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 UTF1Q5T230 341 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 OR4C12Q96R67 309 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 ZC4H2Q9NQZ6 224 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 MOB4Q9Y3A3 225 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 USF3Q68DE3 2245 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 MAP1AP78559 2803 aaPredicted RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 MSGN1A6NI15 193 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 SRRM4A7MD48 611 aaKnown RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 KCNAB3O43448 404 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 TMEM50AO95807 157 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 IFNA17P01571 189 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 IGKV1-16P04430 117 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 NKX2-5P52952 324 aaPredicted RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 SLC38A11Q08AI6 406 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 IL34Q6ZMJ4 242 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 TTC9CQ8N5M4 171 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 THAP8Q8NA92 274 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 SUN5Q8TC36 379 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 PLSCR3Q9NRY6 295 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 WDR83OSQ9Y284 106 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 SPENQ96T58 3664 aaKnown RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 A0A1W2PPE3 182 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 SCGB2A1O75556 95 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 S100A7P31151 101 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 PPT1P50897 306 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 LRRC37A5PQ49AS3 106 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 ZNF471Q9BX82 626 aaPredicted RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 WDR61Q9GZS3 305 aaKnown RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 MMP26Q9NRE1 261 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 UQCC1Q9NVA1 299 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 GAR1Q9NY12 217 aaKnown RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 ZNRD1Q9P1U0 126 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 ARL2-SNX15V9GYD0 113 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 RAB19A4D1S5 217 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 A6NDX4 124 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 FABP1P07148 127 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 RNASE2P10153 161 aaKnown RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 SAA4P35542 130 aa5.74□□□□□ -1.49
NUP43-201ENST00000340413 ZNF430Q9H8G1 570 aaPredicted RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 METTL1Q9UBP6 276 aaKnown RBP5.74□□□□□ -1.49
NUP43-201ENST00000340413 FAM24AA6NFZ4 105 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 HBE1P02100 147 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 TMEM11P17152 192 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 OPRK1P41145 380 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 CAV2P51636 162 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 RAB31Q13636 194 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 PDZD9Q8IXQ8 264 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 NANPQ8TBE9 248 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 SCGB1C1Q8TD33 95 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 NPVFQ9HCQ7 196 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 HEYLQ9NQ87 328 aaPredicted RBP5.73□□□□□ -1.49
NUP43-201ENST00000340413 SIRT7Q9NRC8 400 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 HIF1ANQ9NWT6 349 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 FBXO7Q9Y3I1 522 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 LSM4Q9Y4Z0 139 aaKnown RBP5.73□□□□□ -1.49
NUP43-201ENST00000340413 F11RQ9Y624 299 aaKnown RBP5.73□□□□□ -1.49
NUP43-201ENST00000340413 PRRC2AP48634 2157 aaKnown RBP5.73□□□□□ -1.49
NUP43-201ENST00000340413 TEX22C9J3V5 150 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 SELENOTP62341 195 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 C19orf54Q5BKX5 351 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 OR2B11Q5JQS5 317 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 TMEM144Q7Z5S9 345 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 S100A7AQ86SG5 101 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 OR5C1Q8NGR4 320 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 C7orf69Q9H7B7 122 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 SLC45A2Q9UMX9 530 aa5.73□□□□□ -1.49
NUP43-201ENST00000340413 RELNP78509 3460 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 TRAV30A0A087WSZ9 112 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 IGLC7A0M8Q6 106 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 TEX46H3BTG2 121 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 RAB2AP61019 212 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 CD69Q07108 199 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 FAM110DQ8TAY7 271 aaPredicted RBP5.72□□□□□ -1.49
NUP43-201ENST00000340413 VN1R17PQ8TDU5 208 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 GPHA2Q96T91 129 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 ADGRG4Q8IZF6 3080 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 CLDN34H7C241 214 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 IGKV1D-33P01593 117 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 IGKV1-33P01594 117 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 IGF1P05019 195 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 RPL29P47914 159 aaKnown RBP5.72□□□□□ -1.49
NUP43-201ENST00000340413 LDLRAD2Q5SZI1 272 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 ETV3LQ6ZN32 361 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 HAPLN4Q86UW8 402 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 Q8N9W7 124 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 MBD3L1Q8WWY6 194 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 C22orf15Q8WYQ4 148 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 TAF15Q92804 592 aaKnown RBP eCLIP5.72□□□□□ -1.49
NUP43-201ENST00000340413 WFDC1Q9HC57 220 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 KIAA2026Q5HYC2 2103 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 CGB1A6NKQ9 187 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 SEC14L6B5MCN3 397 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 RBMXL2O75526 392 aaKnown RBP5.72□□□□□ -1.49
NUP43-201ENST00000340413 ACTL6BO94805 426 aa5.72□□□□□ -1.49
NUP43-201ENST00000340413 FAM157CP0CG43 387 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms