RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 ST3GAL4Q11206 333 aa12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 RNF212Q495C1 297 aa12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 MS4A15Q8N5U1 240 aa12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 FAM24BQ8N5W8 94 aa12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 SCARB1Q8WTV0 552 aa12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 GIMAP1Q8WWP7 306 aa12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 HSD17B10Q99714 261 aaKnown RBP12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 CENPOQ9BU64 300 aa12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 SMPD3Q9NY59 655 aaPredicted RBP12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 OR2W1Q9Y3N9 320 aa12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 FAT1Q14517 4588 aa12.66□□□□□ -0.38
LRPAP1-201ENST00000296325 IGHV3-49A0A0A0MS15 119 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 IGKV1D-13A0A0B4J2D9 117 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 MFNGO00587 321 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 SLC22A5O76082 557 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 UCHL1P09936 223 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 IGKV1-13P0DP09 117 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 SPP1P10451 314 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 PLA2G7Q13093 441 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 HSD17B12Q53GQ0 312 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 ZNF367Q7RTV3 350 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 UBE2DNLQ8IWF7 75 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 STHQ8IWL8 128 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 OR10W1Q8NGF6 305 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 TCTEX1D2Q8WW35 142 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 TBC1D24Q9ULP9 559 aa12.65□□□□□ -0.38
LRPAP1-201ENST00000296325 UBR4Q5T4S7 5183 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 TRAV2A0A0B4J234 112 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 J3QRK9 145 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 K7EIM0 57 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 FGF2P09038 288 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 WT1-ASQ06250 92 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 DGCR14Q96DF8 476 aaKnown RBP12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 RAB3CQ96E17 227 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 FAM210BQ96KR6 192 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 CMTM3Q96MX0 182 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 C9orf16Q9BUW7 83 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 PLGRKTQ9HBL7 147 aa12.64□□□□□ -0.39
LRPAP1-201ENST00000296325 TRAV3A0A0B4J244 114 aa12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 CD5P06127 495 aa12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 SERPINE2P07093 398 aa12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 CLDN12P56749 244 aa12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 PAFAH1B2P68402 229 aa12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 TCF24Q7RTU0 167 aa12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 MFSD4AQ8N468 514 aa12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 FAM3DQ96BQ1 224 aa12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 QTRT1Q9BXR0 403 aaKnown RBP12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 MS4A6AQ9H2W1 248 aa12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 SPATA2Q9UM82 520 aa12.63□□□□□ -0.39
LRPAP1-201ENST00000296325 FLG2Q5D862 2391 aaPredicted RBP12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 IGHV3OR16-13A0A075B7E8 117 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 IGHV3-21A0A0B4J1V1 117 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 IGHV3-74A0A0B4J1X5 117 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 MYL12BO14950 172 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 NUPL2O15504 423 aaKnown RBP12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 CYB5BO43169 146 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 DENRO43583 198 aaKnown RBP12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 GNB3P16520 340 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 NFYAP23511 347 aaPredicted RBP12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 RAB11BQ15907 218 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 POU2AF1Q16633 256 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 C2orf76Q3KRA6 126 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 LILRB2Q8N423 598 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 VSIRQ9H7M9 311 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 TMEM14BQ9NUH8 114 aa12.62□□□□□ -0.39
LRPAP1-201ENST00000296325 TRAV14DV4A0A0A6YYC5 116 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 TMEM272A0A1B0GTI8 110 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 UPK2O00526 184 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 HIST1H1DP16402 221 aaKnown RBP12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 RELQ04864 619 aaPredicted RBP12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 THOC7Q6I9Y2 204 aaKnown RBP12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 SLC25A24Q6NUK1 477 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 ZNF66Q6ZN08 573 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 NANOGP1Q8N7R0 232 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 GPHA2Q96T91 129 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 COMMD5Q9GZQ3 224 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 HRASLSQ9HDD0 168 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 CLEC5AQ9NY25 188 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 TAS2R8Q9NYW2 309 aa12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 F11RQ9Y624 299 aaKnown RBP12.61□□□□□ -0.39
LRPAP1-201ENST00000296325 OR13C7P0DN81 318 aa12.6□□□□□ -0.39
LRPAP1-201ENST00000296325 NPY1RP25929 384 aa12.6□□□□□ -0.39
LRPAP1-201ENST00000296325 ZNF773Q6PK81 442 aa12.6□□□□□ -0.39
LRPAP1-201ENST00000296325 HSD17B13Q7Z5P4 300 aaPredicted RBP12.6□□□□□ -0.39
LRPAP1-201ENST00000296325 UBAC2Q8NBM4 344 aa12.6□□□□□ -0.39
LRPAP1-201ENST00000296325 OR10R2Q8NGX6 335 aa12.6□□□□□ -0.39
LRPAP1-201ENST00000296325 ST8SIA2Q92186 375 aa12.6□□□□□ -0.39
LRPAP1-201ENST00000296325 AK6Q9Y3D8 172 aaKnown RBP12.6□□□□□ -0.39
LRPAP1-201ENST00000296325 RBFOX2O43251 390 aaKnown RBP eCLIP12.59□□□□□ -0.393e-6■■□□□ 13.6
LRPAP1-201ENST00000296325 Q56UQ5 140 aa12.59□□□□□ -0.39
LRPAP1-201ENST00000296325 AIFM2Q9BRQ8 373 aa12.59□□□□□ -0.39
LRPAP1-201ENST00000296325 RAB22AQ9UL26 194 aa12.59□□□□□ -0.39
LRPAP1-201ENST00000296325 DNASE2O00115 360 aaPredicted RBP12.58□□□□□ -0.4
LRPAP1-201ENST00000296325 APOHP02749 345 aaPredicted RBP12.58□□□□□ -0.4
LRPAP1-201ENST00000296325 CTXN2P0C2S0 81 aa12.58□□□□□ -0.4
LRPAP1-201ENST00000296325 DTYMKP23919 212 aa12.58□□□□□ -0.4
LRPAP1-201ENST00000296325 TAS2R31P59538 309 aa12.58□□□□□ -0.4
LRPAP1-201ENST00000296325 LAIR2Q6ISS4 152 aa12.58□□□□□ -0.4
LRPAP1-201ENST00000296325 ZFP1Q6P2D0 407 aa12.58□□□□□ -0.4
LRPAP1-201ENST00000296325 ZNF555Q8NEP9 628 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms