RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 GGACTQ9BVM4 153 aa9.29□□□□□ -0.92
SCAF11-201ENST00000266589 POLR3KQ9Y2Y1 108 aaPredicted RBP9.29□□□□□ -0.92
SCAF11-201ENST00000266589 TIMM9Q9Y5J7 89 aa9.29□□□□□ -0.92
SCAF11-201ENST00000266589 ASH1LQ9NR48 2969 aaKnown RBP9.29□□□□□ -0.92
SCAF11-201ENST00000266589 A0A1B0GV50 99 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 CGB1A6NKQ9 187 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 KRBOX1C9JBD0 128 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 COL8A1P27658 744 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 ELLP55199 621 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-201ENST00000266589 DLK1P80370 383 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 SERF2P84101 59 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 SRSF3P84103 164 aaKnown RBP9.28□□□□□ -0.92
SCAF11-201ENST00000266589 SSX2Q16385 188 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 PRSS8Q16651 343 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 TUSC1Q2TAM9 212 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 DPPA3Q6W0C5 159 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 MMD2Q8IY49 270 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 BPIFCQ8NFQ6 507 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 NARS2Q96I59 477 aaKnown RBP9.28□□□□□ -0.92
SCAF11-201ENST00000266589 RNF5Q99942 180 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 NPCDR1Q9BY65 106 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 VSIRQ9H7M9 311 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 METTL1Q9UBP6 276 aaKnown RBP9.28□□□□□ -0.92
SCAF11-201ENST00000266589 SIGLEC9Q9Y336 463 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 CRYBG3Q68DQ2 2970 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 LRRK2Q5S007 2527 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 FAM208BQ5VWN6 2430 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 A0A1W2PN81 502 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 PAX1P15863 534 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 MDKP21741 143 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-201ENST00000266589 CHRNA7P36544 502 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 SNCAP37840 140 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 ERHP84090 104 aaKnown RBP9.28□□□□□ -0.92
SCAF11-201ENST00000266589 HABP2Q14520 560 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-201ENST00000266589 MINOS1Q5TGZ0 78 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 ZNF787Q6DD87 383 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 CCDC144NLQ6NUI1 221 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 CENPVQ7Z7K6 275 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-201ENST00000266589 DYNAPQ8N1N2 210 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 C17orf50Q8WW18 174 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 TMEM231Q9H6L2 316 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 RPRMQ9NS64 109 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 WDR83OSQ9Y284 106 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 MINOS1-NBL1R4GNA1 71 aa9.28□□□□□ -0.92
SCAF11-201ENST00000266589 A0A1B0GW64 132 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 INS-IGF2F8WCM5 200 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 ACTL6BO94805 426 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 IGKV1D-33P01593 117 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 IGKV1-33P01594 117 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 H2AFB1P0C5Y9 115 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 RNASE2P10153 161 aaKnown RBP9.27□□□□□ -0.93
SCAF11-201ENST00000266589 UBE2E1P51965 193 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 TNXAQ16473 311 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 BSXQ3C1V8 233 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 C2orf83Q53S99 150 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 PPP1R27Q86WC6 154 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 TREM1Q9NP99 234 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 FAM96BQ9Y3D0 163 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 OOSP1A8MZH6 123 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 MOSP00540 346 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 CD24P25063 80 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 ATP5IP56385 69 aaPredicted RBP9.27□□□□□ -0.93
SCAF11-201ENST00000266589 DSCR9P59020 149 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 WT1-ASQ06250 92 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 HES1Q14469 280 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 MMDQ15546 238 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 TMEM41BQ5BJD5 291 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 ARSJQ5FYB0 599 aaPredicted RBP9.27□□□□□ -0.93
SCAF11-201ENST00000266589 TREML4Q6UXN2 200 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 COMMD1Q8N668 190 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 ZNF709Q8N972 641 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 FBXL15Q9H469 300 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 TBL2Q9Y4P3 447 aaKnown RBP9.27□□□□□ -0.93
SCAF11-201ENST00000266589 ABCA2Q9BZC7 2435 aa9.27□□□□□ -0.93
SCAF11-201ENST00000266589 C17orf112F2Z3M2 114 aa9.26□□□□□ -0.93
SCAF11-201ENST00000266589 SNRNP70P08621 437 aaKnown RBP9.26□□□□□ -0.93
SCAF11-201ENST00000266589 MAS1LP35410 378 aa9.26□□□□□ -0.93
SCAF11-201ENST00000266589 RPL27AP46776 148 aaKnown RBP9.26□□□□□ -0.93
SCAF11-201ENST00000266589 GNB1P62873 340 aa9.26□□□□□ -0.93
SCAF11-201ENST00000266589 PLGLAQ15195 96 aa9.26□□□□□ -0.93
SCAF11-201ENST00000266589 ACSM6Q6P461 480 aa9.26□□□□□ -0.93
SCAF11-201ENST00000266589 WNK2Q9Y3S1 2297 aa9.26□□□□□ -0.93
SCAF11-201ENST00000266589 MPDU1O75352 247 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 OR13C7P0DN81 318 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 COMPP49747 757 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-201ENST00000266589 PAX8Q06710 450 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 FFAR4Q5NUL3 377 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 SPSB3Q6PJ21 355 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 CCDC28AQ8IWP9 274 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 LFNGQ8NES3 379 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 SFT2D1Q8WV19 159 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 EAF1Q96JC9 268 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-201ENST00000266589 NPVFQ9HCQ7 196 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 TMEM218A2RU14 115 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 NBR2O15453 112 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 REG1AP05451 166 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 PLA2G2AP14555 144 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 SAA4P35542 130 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 KRTAP10-9P60411 292 aa9.25□□□□□ -0.93
SCAF11-201ENST00000266589 RAB2AP61019 212 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms