RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Tmem212Q8C6V3 187 aa9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Txnl1Q8CDN6 289 aaKnown RBP9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Mtg1Q8R2R6 326 aa9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Olfr447Q8VGP6 310 aa9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Olfr1038Q8VGS1 319 aa9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Basp1Q91XV3 226 aa9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Fbxo25Q9D2Y6 357 aa9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Aig1Q9D8B1 262 aa9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Rcl1Q9JJT0 373 aaKnown RBP9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Tmem37Q9JJV3 211 aa9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Hspg2Q05793 3707 aaKnown RBP9.72□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 Notch3Q61982 2318 aa9.71□□□□□ -0.85
Ccdc28b-202ENSMUST00000106035 AsmtD3KU66 387 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Tmem200bD3Z0P8 284 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gm21818J3KMS6 170 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Plscr5J3QM92 274 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gm379J3QQ19 296 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Sprr3O09116 238 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Hist1h1cP15864 212 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Vmn1r181Q0P547 304 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Plk3Q60806 631 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Olfr147Q60886 317 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 ScocQ78YZ6 125 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Eri1Q7TMF2 345 aaKnown RBP9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Olfr1347Q8VF33 319 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Olfr1228Q8VGM9 323 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Tmbim6Q9D2C7 237 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Olfr632Q9EPN9 317 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Enpp5Q9EQG7 477 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Fhl3Q9R059 289 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Syt6Q9R0N8 511 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Unc119Q9Z2R6 240 aa9.71□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Ighv1-26A0A075B5V0 117 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Trbv20A0A0B4J1H5 111 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Hacd4A2AKM2 232 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gm21560D3Z7A4 205 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Vmn2r83E9Q0G7 864 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gm8212F6ZMY5 213 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gm7137J3QMW1 236 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 NnmtO55239 264 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Il1bP10749 269 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Srp9P49962 86 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gabarapl2P60521 117 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Rps25P62852 125 aaKnown RBP9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gdf3Q07104 366 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Dio1Q61153 257 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Ypel2Q65Z95 119 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Fbxo27Q6DIA9 280 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Ube2d2bQ6ZWY6 147 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Parp16Q7TMM8 322 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 HeltQ7TS99 240 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Ankrd33Q8BXP5 385 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Zmat4Q8BZ94 229 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 GaptQ8CB93 157 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Vmn1r32Q8R2D9 302 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Ttc4Q8R3H9 386 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Olfr1370Q8VFG4 316 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Wdr89Q9D0R9 386 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Eaf1Q9D4C5 268 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Ypel1Q9ESC7 118 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Bhlha15Q9QYC3 197 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 VwfQ8CIZ8 2813 aa9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 FasnP19096 2504 aaKnown RBP9.7□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Igkv4-57A0A0A6YYE7 117 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Ube2ql1A0PJN4 161 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Olfr1314A2AVL6 312 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Vmn1r13G5E8I3 300 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gm8050L7N2E3 205 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 DffbO54788 344 aaKnown RBP9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Cst7O89098 144 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Kcng3P59053 433 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gm5464Q3UY29 175 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Zfand3Q497H0 227 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Zfp82Q6P9Y7 530 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Tas2r113Q7M711 309 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Sult1c1Q80VR3 304 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Fbxw26Q8BI58 466 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Mob1bQ8BPB0 216 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Rnf182Q8C432 247 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gm26566Q8CAC1 153 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Fam216bQ8CC14 138 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Fate1Q8CEK7 99 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Dhrs7cQ8CHS7 311 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Vmn1r201Q8R262 300 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Olfr1384Q8VFA8 318 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Olfr355Q8VFP6 310 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 DenrQ9CQJ6 198 aaKnown RBP9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Stra6lQ9DBN1 621 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Irak1bp1Q9ESJ7 259 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Nqo2Q9JI75 231 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Syt7Q9R0N7 403 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 D17h6s53eQ9Z1R4 293 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Gm26992S4R1A3 76 aa9.69□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Trav13n-4A0A0G2JG01 110 aa9.68□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Pgbd1E9Q492 415 aa9.68□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Rbbp9O88851 186 aa9.68□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Lin7cO88952 197 aaKnown RBP9.68□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Lynx1P0DP60 116 aa9.68□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Slc6a1P31648 599 aa9.68□□□□□ -0.86
Ccdc28b-202ENSMUST00000106035 Hes1P35428 282 aa9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms