RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Klk1b24Q61754 263 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Zfp948Q6DFU8 667 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Flrt1Q6RKD8 674 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Wdr82Q8BFQ4 313 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Sec22aQ8BH47 307 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Mef2cQ8CFN5 474 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Slc35e4Q8K3D6 351 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Rnf113a1Q8R3P8 341 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Myoz1Q9JK37 296 aa19.01■□□□□ 0.63
Scn1b-201ENSMUST00000098548 6430628N08RikA0A0U1RQ45 177 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm6882J3KMT3 313 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Mdga2P60755 949 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 S100a3P62818 101 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm10662Q3UT86 313 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm10600Q8BQ57 223 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr1259Q8VEZ1 309 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr1044Q8VGR9 314 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Prss41Q920S2 322 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 GhsrQ99P50 364 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Armc10Q9D0L7 306 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Wdr20Q9D5R2 567 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Col6a4A2AX52 2309 aa19■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Vmn1r57K7N731 310 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr905L7N1X5 310 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Fabp7P51880 132 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gsc2P56916 198 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Tle4Q62441 773 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 CelQ64285 599 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gpr119Q7TQP3 335 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Bricd5Q8BV89 174 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm16503Q8C6M9 103 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Rab14Q91V41 215 aaKnown RBP18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Sapcd1Q9CY86 146 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Ndrg3Q9QYF9 375 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Ncoa6Q9JL19 2067 aa18.99■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm29049A0A087WSM5 227 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm6460F6YJZ8 199 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Ear14F6YUX7 155 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Tex45G3XA23 500 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm21972J3QN38 98 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm21118J3QPK8 227 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm5458L7N219 204 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Rnase2O35291 155 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Col8a2P25318 699 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm813Q3UWK9 176 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm20909Q5FWB5 227 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm20852Q5M8R5 227 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Plk3Q60806 631 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm20917Q62457 227 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm20809Q62458 227 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm20865Q62460 227 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Dlx1Q64317 255 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Rtn4rl2Q7M6Z0 420 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr921Q7TRC0 313 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm20738Q810R8 227 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Acsm5Q8BGA8 578 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 LipkQ8BM14 398 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr1420Q8VF55 309 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr1384Q8VFA8 318 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr46Q8VGJ4 318 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Plekhf2Q91WB4 249 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Dnttip1Q99LB0 328 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm20806Q9D9T3 227 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Ergic1Q9DC16 290 aaKnown RBP18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 TslpQ9JIE6 140 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Crim1Q9JLL0 1037 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 St6galnac5Q9QYJ1 336 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Dnajc13D4AFX7 2248 aaKnown RBP18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 GzmbP04187 247 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 GzmaP11032 260 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Zic3Q62521 466 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 ClmQ7TSN2 230 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Smim4Q8C1Q6 80 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Tmem267Q8VDR5 215 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr137Q8VFC2 312 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Rnase6Q9D244 153 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Wrap73Q9JM98 462 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Syt6Q9R0N8 511 aa18.98■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Nav2E9Q842 2432 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Pm20d2A3KG59 431 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr221B2RVX8 311 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Pwwp2bE9Q9M8 600 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 PipP02816 146 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 RelP15307 587 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm10645Q3UPY1 145 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Ewsr1Q61545 655 aaKnown RBP18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr1465Q7TQR2 307 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr452Q7TRV8 317 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Tm2d3Q8BJ83 261 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Tmem221Q8K071 230 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr1427Q8VFU9 311 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr38Q8VGP4 317 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Cisd1Q91WS0 108 aaKnown RBP18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Csmd1Q923L3 3564 aa18.97■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm20824A0A087WS97 222 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Gm36368A0A1D5RLK8 91 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Olfr1406E9Q8X1 310 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Atf6bO35451 699 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Mas1P30554 324 aa18.96■□□□□ 0.63
Scn1b-201ENSMUST00000098548 Pax5Q02650 391 aa18.96■□□□□ 0.63
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms