Protein–RNA interactions for Protein: Q8R3P8

Rnf113a1, Ring finger protein 113A1, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf113a1Q8R3P8 Gm25239-201ENSMUST00000174915 86 ntBASIC32.35■■■□□ 2.77
Rnf113a1Q8R3P8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Rnf113a1Q8R3P8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rnf113a1Q8R3P8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rnf113a1Q8R3P8 Gm15042-201ENSMUST00000120212 883 ntBASIC28.23■■■□□ 2.11
Rnf113a1Q8R3P8 Gm24109-201ENSMUST00000175489 103 ntBASIC28.05■■■□□ 2.08
Rnf113a1Q8R3P8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Rnf113a1Q8R3P8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Rnf113a1Q8R3P8 Gm15045-201ENSMUST00000117359 883 ntBASIC27.56■■■□□ 2
Rnf113a1Q8R3P8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Rnf113a1Q8R3P8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Rnf113a1Q8R3P8 Psd-208ENSMUST00000224556 2034 ntBASIC27.31■■□□□ 1.96
Rnf113a1Q8R3P8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Rnf113a1Q8R3P8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Rnf113a1Q8R3P8 Gm23366-201ENSMUST00000175022 89 ntBASIC27.01■■□□□ 1.91
Rnf113a1Q8R3P8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rnf113a1Q8R3P8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Rnf113a1Q8R3P8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Rnf113a1Q8R3P8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rnf113a1Q8R3P8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rnf113a1Q8R3P8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.2■■□□□ 1.78
Rnf113a1Q8R3P8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Rnf113a1Q8R3P8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rnf113a1Q8R3P8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.03■■□□□ 1.76
Rnf113a1Q8R3P8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rnf113a1Q8R3P8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.02■■□□□ 1.76
Rnf113a1Q8R3P8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rnf113a1Q8R3P8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rnf113a1Q8R3P8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
Rnf113a1Q8R3P8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rnf113a1Q8R3P8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Rnf113a1Q8R3P8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
Rnf113a1Q8R3P8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Rnf113a1Q8R3P8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
Rnf113a1Q8R3P8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf113a1Q8R3P8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rnf113a1Q8R3P8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Rnf113a1Q8R3P8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Rnf113a1Q8R3P8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Rnf113a1Q8R3P8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Rnf113a1Q8R3P8 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Rnf113a1Q8R3P8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.53■■□□□ 1.68
Rnf113a1Q8R3P8 Gm25238-201ENSMUST00000174914 89 ntBASIC25.53■■□□□ 1.68
Rnf113a1Q8R3P8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Rnf113a1Q8R3P8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.44■■□□□ 1.66
Rnf113a1Q8R3P8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf113a1Q8R3P8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rnf113a1Q8R3P8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Rnf113a1Q8R3P8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rnf113a1Q8R3P8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rnf113a1Q8R3P8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
Rnf113a1Q8R3P8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.99■■□□□ 1.59
Rnf113a1Q8R3P8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Rnf113a1Q8R3P8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Rnf113a1Q8R3P8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.89■■□□□ 1.58
Rnf113a1Q8R3P8 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Rnf113a1Q8R3P8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rnf113a1Q8R3P8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.81■■□□□ 1.56
Rnf113a1Q8R3P8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.72■■□□□ 1.55
Rnf113a1Q8R3P8 Gm27325-201ENSMUST00000175467 74 ntBASIC24.7■■□□□ 1.54
Rnf113a1Q8R3P8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Rnf113a1Q8R3P8 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.68■■□□□ 1.54
Rnf113a1Q8R3P8 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
Rnf113a1Q8R3P8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rnf113a1Q8R3P8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.61■■□□□ 1.53
Rnf113a1Q8R3P8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnf113a1Q8R3P8 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.54■■□□□ 1.52
Rnf113a1Q8R3P8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.51■■□□□ 1.51
Rnf113a1Q8R3P8 Gm25262-201ENSMUST00000174934 133 ntBASIC24.5■■□□□ 1.51
Rnf113a1Q8R3P8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Rnf113a1Q8R3P8 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.47■■□□□ 1.51
Rnf113a1Q8R3P8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Rnf113a1Q8R3P8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf113a1Q8R3P8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.38■■□□□ 1.49
Rnf113a1Q8R3P8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rnf113a1Q8R3P8 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rnf113a1Q8R3P8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rnf113a1Q8R3P8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rnf113a1Q8R3P8 Rab21-202ENSMUST00000218831 843 ntBASIC24.3■■□□□ 1.48
Rnf113a1Q8R3P8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rnf113a1Q8R3P8 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.24■■□□□ 1.47
Rnf113a1Q8R3P8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rnf113a1Q8R3P8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Rnf113a1Q8R3P8 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf113a1Q8R3P8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf113a1Q8R3P8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf113a1Q8R3P8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
Rnf113a1Q8R3P8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.05■■□□□ 1.44
Rnf113a1Q8R3P8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.03■■□□□ 1.44
Rnf113a1Q8R3P8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf113a1Q8R3P8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Rnf113a1Q8R3P8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf113a1Q8R3P8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf113a1Q8R3P8 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Rnf113a1Q8R3P8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.98■■□□□ 1.43
Rnf113a1Q8R3P8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.97■■□□□ 1.43
Rnf113a1Q8R3P8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf113a1Q8R3P8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf113a1Q8R3P8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Rnf113a1Q8R3P8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms