RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 DEDDO75618 318 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 TSPAN9O75954 239 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 LYL1P12980 280 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 C4BPBP20851 252 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 CD24P25063 80 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 COMPP49747 757 aaPredicted RBP9.52□□□□□ -0.89
CDRT1-206ENST00000571263 S100A10P60903 97 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 RPL23AP62750 156 aaKnown RBP9.52□□□□□ -0.89
CDRT1-206ENST00000571263 CXorf66Q5JRM2 361 aaPredicted RBP9.52□□□□□ -0.89
CDRT1-206ENST00000571263 NOXA1Q86UR1 476 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 BCL6BQ8N143 479 aaPredicted RBP9.52□□□□□ -0.89
CDRT1-206ENST00000571263 FAM71E2Q8N5Q1 922 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 SMIM8Q96KF7 97 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 QTRT1Q9BXR0 403 aaKnown RBP9.52□□□□□ -0.89
CDRT1-206ENST00000571263 FBXL15Q9H469 300 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 ZNF430Q9H8G1 570 aaPredicted RBP9.52□□□□□ -0.89
CDRT1-206ENST00000571263 LSM5Q9Y4Y9 91 aaKnown RBP9.52□□□□□ -0.89
CDRT1-206ENST00000571263 WSB1Q9Y6I7 421 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 TACC2O95359 2948 aa9.52□□□□□ -0.89
CDRT1-206ENST00000571263 HECTD1Q9ULT8 2610 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 TRAV3A0A0B4J244 114 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 CHST1O43916 411 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 CNIH1O95406 144 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 HLA-DRB1P01911 266 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDRT1-206ENST00000571263 P2RY1P47900 373 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 ERHP84090 104 aaKnown RBP9.51□□□□□ -0.89
CDRT1-206ENST00000571263 PRCDQ00LT1 54 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 IZUMO4Q1ZYL8 232 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 LRRC37A5PQ49AS3 106 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 ZNF546Q86UE3 836 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 Q8N9W7 124 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 INO80EQ8NBZ0 244 aaPredicted RBP9.51□□□□□ -0.89
CDRT1-206ENST00000571263 DTD1Q8TEA8 209 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 WDR89Q96FK6 387 aaPredicted RBP9.51□□□□□ -0.89
CDRT1-206ENST00000571263 TMEM68Q96MH6 324 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 JMJD8Q96S16 334 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 SLC25A31Q9H0C2 315 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 RBKSQ9H477 322 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 PLEKHA3Q9HB20 300 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 NDUFA4L2Q9NRX3 87 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 U3KQ87 197 aa9.51□□□□□ -0.89
CDRT1-206ENST00000571263 TSC22D2O75157 780 aa9.5□□□□□ -0.89
CDRT1-206ENST00000571263 SRD5A1P18405 259 aa9.5□□□□□ -0.89
CDRT1-206ENST00000571263 PAX6P26367 422 aa9.5□□□□□ -0.89
CDRT1-206ENST00000571263 CNTFRP26992 372 aa9.5□□□□□ -0.89
CDRT1-206ENST00000571263 RPL27AP46776 148 aaKnown RBP9.5□□□□□ -0.89
CDRT1-206ENST00000571263 SUB1P53999 127 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDRT1-206ENST00000571263 OR2B8PP59922 312 aa9.5□□□□□ -0.89
CDRT1-206ENST00000571263 POLR2GP62487 172 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDRT1-206ENST00000571263 TNXAQ16473 311 aa9.5□□□□□ -0.89
CDRT1-206ENST00000571263 ZNF418Q8TF45 676 aaPredicted RBP9.5□□□□□ -0.89
CDRT1-206ENST00000571263 DCUN1D4Q92564 292 aa9.5□□□□□ -0.89
CDRT1-206ENST00000571263 RNF126Q9BV68 326 aa9.5□□□□□ -0.89
CDRT1-206ENST00000571263 HEYLQ9NQ87 328 aaPredicted RBP9.5□□□□□ -0.89
CDRT1-206ENST00000571263 VPREB3Q9UKI3 123 aa9.5□□□□□ -0.89
CDRT1-206ENST00000571263 RCL1Q9Y2P8 373 aaKnown RBP9.5□□□□□ -0.89
CDRT1-206ENST00000571263 WNK2Q9Y3S1 2297 aa9.5□□□□□ -0.89
CDRT1-206ENST00000571263 NBPF19A0A087WUL8 3843 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 TRAV14DV4A0A0A6YYC5 116 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 CLDN34H7C241 214 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 KCNAB3O43448 404 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 CA2P00918 260 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 IGHV4-59P01825 116 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 HTR2BP41595 481 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 HOXA1P49639 335 aaPredicted RBP9.49□□□□□ -0.89
CDRT1-206ENST00000571263 RPL15P61313 204 aaKnown RBP9.49□□□□□ -0.89
CDRT1-206ENST00000571263 TMEM267Q0VDI3 215 aaPredicted RBP9.49□□□□□ -0.89
CDRT1-206ENST00000571263 FXYD3Q14802 87 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 ACOT7LQ6ZUV0 252 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 OR2C3Q8N628 320 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 C5orf56Q8N8D9 126 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 OR1L6Q8NGR2 347 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 C22orf15Q8WYQ4 148 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 PSENENQ9NZ42 101 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 MBD2Q9UBB5 411 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 MED13LQ71F56 2210 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 CSMD2Q7Z408 3487 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 MAST4O15021 2626 aa9.49□□□□□ -0.89
CDRT1-206ENST00000571263 FXYD6-FXYD2A0A087WZ82 144 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 A0A0D9SG52 128 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 H0YIZ8 118 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 CYB5BO43169 146 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 HOXA3O43365 443 aaPredicted RBP9.48□□□□□ -0.89
CDRT1-206ENST00000571263 SSSCA1O60232 199 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 SNCAP37840 140 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 RAB11AP62491 216 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 BAXQ07812 192 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 OR2F1Q13607 317 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 ZNF345Q14585 488 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 LY6EQ16553 131 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 MRGPRG-AS1Q2M3A8 158 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 Q5BKY6 102 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 SIGLECL1Q8N7X8 197 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 SRSF12Q8WXF0 261 aaKnown RBP9.48□□□□□ -0.89
CDRT1-206ENST00000571263 ZNF48Q96MX3 618 aaPredicted RBP9.48□□□□□ -0.89
CDRT1-206ENST00000571263 HINT2Q9BX68 163 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 MAGT1Q9H0U3 335 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 LYRM2Q9NU23 88 aaPredicted RBP9.48□□□□□ -0.89
CDRT1-206ENST00000571263 ZNF580Q9UK33 172 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms