RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 HLA-GP17693 338 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 TAS2R31P59538 309 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 DYRK1AQ13627 763 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 C15orf32Q32M92 178 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 OR4A47Q6IF82 309 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 ZNF343Q6P1L6 599 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 ZNF818PQ6ZRF7 136 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 GTSCR1Q86UQ5 136 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 HAPLN4Q86UW8 402 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 TTC9CQ8N5M4 171 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 DYNLRB2Q8TF09 96 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 FBXL7Q9UJT9 491 aa7.14□□□□□ -1.27
CHRFAM7A-204ENST00000562729 RGS5O15539 181 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 RBFOX2O43251 390 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 HPGDSO60760 199 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 SNAPC5O75971 98 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 IFNA6P05013 189 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 REG1AP05451 166 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 RPA2P15927 270 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 HIST1H1BP16401 226 aaKnown RBP7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 HRH1P35367 487 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 MECP2P51608 486 aaKnown RBP7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 KLF5Q13887 457 aaPredicted RBP7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 RNASE12Q5GAN4 147 aaKnown RBP7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 GPR107Q5VW38 600 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 LCN12Q6JVE5 192 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 LPCAT3Q6P1A2 487 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 GPR141Q7Z602 305 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 SGPP2Q8IWX5 399 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 PUSL1Q8N0Z8 303 aaKnown RBP7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 EEF1AKMT3Q96AZ1 226 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 CMTM3Q96MX0 182 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 HINT2Q9BX68 163 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 ZMAT4Q9H898 229 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 SCPEP1Q9HB40 452 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 SLC2A9Q9NRM0 540 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 BET1LQ9NYM9 111 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 THYN1Q9P016 225 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 LSM4Q9Y4Z0 139 aaKnown RBP7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 U3KQK5 164 aa7.13□□□□□ -1.27
CHRFAM7A-204ENST00000562729 NPIPB5A8MRT5 1133 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 GPR31O00270 319 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 NOL3O60936 208 aaKnown RBP7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 S1PR2O95136 353 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 TRBV12-3P01733 135 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 IGHV3-23P01764 117 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 ELK1P19419 428 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 PSMB6P28072 239 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 GNRHRP30968 328 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 RCVRNP35243 200 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 EIF4EBP1Q13541 118 aaPredicted RBP7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 MRGPRG-AS1Q2M3A8 158 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 PHLDA2Q53GA4 152 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 DHRS11Q6UWP2 260 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 C15orf40Q8WUR7 153 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 MOB3AQ96BX8 217 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 WWC2-AS2Q96NR7 200 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 MRPS26Q9BYN8 205 aaKnown RBP7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 PLEKHA2Q9HB19 425 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 TMEM140Q9NV12 185 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 COMMD9Q9P000 198 aa7.12□□□□□ -1.27
CHRFAM7A-204ENST00000562729 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 ZNF320A2RRD8 509 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 MARCH11A6NNE9 402 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 TEX22C9J3V5 150 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 PPP5D1E7EU14 171 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 UPK2O00526 184 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 EIF4EBP3O60516 100 aaPredicted RBP7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 GGCTO75223 188 aaKnown RBP7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 RBMXL2O75526 392 aaKnown RBP7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 PGLYRP1O75594 196 aaPredicted RBP7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 KRASP01116 189 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 IGLV1-51P01701 117 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 IL6RP08887 468 aaPredicted RBP7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 FRMD6-AS1P0C7T7 363 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 ZNF735P0CB33 412 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 PGAM2P15259 253 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 AREGP15514 252 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 ZNF182P17025 639 aaPredicted RBP7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 F2RP25116 425 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 ARL3P36405 182 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 LPAR6P43657 344 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 ZNF45Q02386 682 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 CLEC19AQ6UXS0 136 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 Q8N402 240 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 FCAMRQ8WWV6 532 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 DGCR14Q96DF8 476 aaKnown RBP7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 CXorf58Q96LI9 332 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 QTRT1Q9BXR0 403 aaKnown RBP7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 TUBA4BQ9H853 241 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 EXTL2Q9UBQ6 330 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 ADAM30Q9UKF2 790 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 S4R3C0 116 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 COL7A1Q02388 2944 aa7.11□□□□□ -1.27
CHRFAM7A-204ENST00000562729 TRBV7-1A0A0A6YYK4 115 aa7.1□□□□□ -1.27
CHRFAM7A-204ENST00000562729 TRBV9A0A0B4J1U6 114 aa7.1□□□□□ -1.27
CHRFAM7A-204ENST00000562729 TRIM64CA6NLI5 447 aa7.1□□□□□ -1.27
CHRFAM7A-204ENST00000562729 BMPR1BO00238 502 aa7.1□□□□□ -1.27
CHRFAM7A-204ENST00000562729 SERPINE2P07093 398 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms