RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 MSGN1A6NI15 193 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 ADAP1O75689 374 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 HOXB5P09067 269 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 HKR1P10072 659 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 EGR2P11161 476 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-215ENST00000554997 COMPP49747 757 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-215ENST00000554997 GNB1P62873 340 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 SSBP2P81877 361 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-215ENST00000554997 TNXAQ16473 311 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 IZUMO4Q1ZYL8 232 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 AARDQ4LEZ3 155 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 GGNBP1Q5YKI7 109 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 FOXRED2Q8IWF2 684 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 UXS1Q8NBZ7 420 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 OR4F5Q8NH21 305 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 OR5B3Q8NH48 314 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 OR2T6Q8NHC8 308 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 COMMD5Q9GZQ3 224 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 ZNF580Q9UK33 172 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 FOXA2Q9Y261 457 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-215ENST00000554997 NSG2Q9Y328 171 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 OR51B2Q9Y5P1 312 aa8.05□□□□□ -1.12
SYNE2-215ENST00000554997 C15orf61A6NNL5 157 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 E7EUB6 86 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 AP4M1O00189 453 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 PITX3O75364 302 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 RBMXL2O75526 392 aaKnown RBP8.04□□□□□ -1.12
SYNE2-215ENST00000554997 SULT1A3P0DMM9 295 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 SULT1A4P0DMN0 295 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 CRIP2P52943 208 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-215ENST00000554997 OR2B8PP59922 312 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 HSPE1P61604 102 aaKnown RBP8.04□□□□□ -1.12
SYNE2-215ENST00000554997 TMEM267Q0VDI3 215 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-215ENST00000554997 SMCO1Q147U7 214 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 AKIRIN2Q53H80 203 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 OR1L8Q8NGR8 309 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 OR52E5Q8NH55 327 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 SGMS2Q8NHU3 365 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 LINC01006Q8NI28 216 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 SRSF12Q8WXF0 261 aaKnown RBP8.04□□□□□ -1.12
SYNE2-215ENST00000554997 TAF15Q92804 592 aaKnown RBP eCLIP8.04□□□□□ -1.12
SYNE2-215ENST00000554997 TMEM68Q96MH6 324 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 QTRT1Q9BXR0 403 aaKnown RBP8.04□□□□□ -1.12
SYNE2-215ENST00000554997 GON7Q9BXV9 100 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 NDUFA4L2Q9NRX3 87 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 SERTAD4Q9NUC0 356 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 CACNG5Q9UF02 275 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 ALG5Q9Y673 324 aa8.04□□□□□ -1.12
SYNE2-215ENST00000554997 A0A1B0GUS0 222 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 C13orf42A0A1B0GVH6 325 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 TMEM89A2RUT3 159 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 CLPSL1A2RUU4 121 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 CGB1A6NKQ9 187 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 SSNA1O43805 119 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 OPN1MWP04001 364 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 TRAPPC2P0DI81 140 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 TRAPPC2BP0DI82 140 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 OPN1MW2P0DN77 364 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 OPN1MW3P0DN78 364 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 MYOD1P15172 320 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 RPL27AP46776 148 aaKnown RBP8.03□□□□□ -1.12
SYNE2-215ENST00000554997 SPCS3P61009 180 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 FOXL1Q12952 345 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 PDLIM3Q53GG5 364 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-215ENST00000554997 ARSJQ5FYB0 599 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-215ENST00000554997 THOC7Q6I9Y2 204 aaKnown RBP8.03□□□□□ -1.12
SYNE2-215ENST00000554997 Q6ZNX1 250 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 ARPC1AQ92747 370 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 OR10C1Q96KK4 312 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 SPIN2AQ99865 258 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 SPIN2BQ9BPZ2 258 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 SRSF8Q9BRL6 282 aaKnown RBP8.03□□□□□ -1.12
SYNE2-215ENST00000554997 WNT10AQ9GZT5 417 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 PARP11Q9NR21 331 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 CUBNO60494 3623 aa8.03□□□□□ -1.12
SYNE2-215ENST00000554997 TRAV41A0A0B4J266 112 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 A0A1B0GW64 132 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 MPTX1A8MV57 137 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 TEX22C9J3V5 150 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 INS-IGF2F8WCM5 200 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 ATP6V0E1O15342 81 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 ST8SIA3O43173 380 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 IFNA17P01571 189 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 VDAC2P45880 294 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-215ENST00000554997 NDPQ00604 133 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 PRCDQ00LT1 54 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 ID3Q02535 119 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 C2orf68Q2NKX9 166 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 IAH1Q2TAA2 248 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-215ENST00000554997 GSG1LQ6UXU4 331 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 HSD17B13Q7Z5P4 300 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-215ENST00000554997 CENPVQ7Z7K6 275 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-215ENST00000554997 STPG2Q8N412 459 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 TTC9CQ8N5M4 171 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-215ENST00000554997 LFNGQ8NES3 379 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 OR1S1Q8NH92 325 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 GRPEL2Q8TAA5 225 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 ABHD5Q8WTS1 349 aa8.02□□□□□ -1.13
SYNE2-215ENST00000554997 TMEM158Q8WZ71 300 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms