RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Cln5Q3UMW8 341 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 MybphlQ5FW53 355 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr1447Q8VFX3 309 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Cisd1Q91WS0 108 aaKnown RBP10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Mrpl20Q9CQL4 149 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Hcfc1r1Q9CYQ5 120 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm45623A0A1B0GSF6 103 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Trav12-2A0N8N6 114 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Bcat2O35855 393 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 P01804 111 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Mpzl1Q3TEW6 270 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Lrrtm3Q8BZ81 582 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr1030Q8VFL5 318 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr351Q8VGK1 310 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Tmem126bQ9D1R1 230 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Ldb3Q9JKS4 723 aaKnown RBP10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Col1a1P11087 1453 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 CroccQ8CJ40 2009 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Ighv9-2A0A0B4J1J4 117 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm5093E9PZB3 174 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Dhrs3O88876 302 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Klk1b5P15945 261 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Ypel5P62700 121 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Ceacam9Q78T27 234 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 TxnipQ8BG60 397 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Clec14aQ8VCP9 459 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Q9CYS6 286 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Bhlha15Q9QYC3 197 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Cldn14Q9Z0S3 239 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Myo10F8VQB6 2062 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Ccdc88aQ5SNZ0 1873 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Il4P07750 140 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 PtgfrP43117 366 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 PpoxP51175 477 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 NcanP55066 1268 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Dok1P97465 482 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Drd1Q61616 446 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 SnrpcQ62241 159 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr1028Q7TR89 324 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Cacfd1Q8BG21 171 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Clec2hQ8C1T8 218 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Vmn1r202Q8R259 302 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr1454Q8VFW2 307 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Lamtor1Q9CQ22 161 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Tnfrsf12aQ9CR75 129 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 9230112D13RikQ9D260 137 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Pfn3Q9DAD6 137 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Josd1Q9DBJ6 202 aa10.82□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 P01806 116 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 4930512M02RikQ5SQK8 218 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Ppp1r3cQ7TMB3 317 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 GpnmbQ99P91 574 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Vmn1r46Q9EQ45 309 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr1024A2ASU7 327 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr1029A2ATE0 324 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Saxo1B1AXP3 476 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Rbm24D3Z4I3 236 aaKnown RBP10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Fcgr3P08508 261 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Defa-rs2P17534 91 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Rag2P21784 527 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Ppp1ccP63087 323 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 March5Q3KNM2 278 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Plpp1Q61469 283 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 G6pc3Q6NSQ9 346 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr1408Q8VG32 310 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Tnrc6bQ8BKI2 1810 aaKnown RBP10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Defa1P11477 93 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 P2ry2P35383 373 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Trav5d-4Q5R1F6 114 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Cd200r3Q5UKY4 296 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Plk3Q60806 631 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr150Q60895 312 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Tob1Q61471 362 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 AdoQ6PDY2 256 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 PpifQ99KR7 206 aaKnown RBP10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 PdfS4R2K0 231 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Spta1P08032 2415 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Prpmp5E9PXN1 296 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr556E9Q549 324 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 P01803 113 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gpm6bP35803 328 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Cox7a2P48771 83 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Rnd3P61588 244 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Defa20Q45VN2 95 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Scgb2b24Q7M747 112 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Smap2Q7TN29 428 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Olfr1512Q8VF72 313 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Ly6iQ9WU67 134 aa10.81□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm29049A0A087WSM5 227 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm36864A0A1Y7VJE6 447 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm20503G3UZK1 150 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm21118J3QPK8 227 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Fgf13P70377 245 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm20909Q5FWB5 227 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm20852Q5M8R5 227 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 NppcQ61839 126 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm20917Q62457 227 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm20809Q62458 227 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 Gm20865Q62460 227 aa10.8□□□□□ -0.68
Pcdhac1-201ENSMUST00000007584 ShbQ6PD21 503 aa10.8□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms