RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 TMEM222Q9H0R3 208 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 NAA60Q9H7X0 242 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 ZNF430Q9H8G1 570 aaPredicted RBP6.59□□□□□ -1.35
VRK3-211ENST00000596445 PARP11Q9NR21 331 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 BET1LQ9NYM9 111 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 KCNIP3Q9Y2W7 256 aa6.59□□□□□ -1.35
VRK3-211ENST00000596445 ARPC1BO15143 372 aaKnown RBP6.58□□□□□ -1.36
VRK3-211ENST00000596445 ATP6V0E1O15342 81 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 ACTL6BO94805 426 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 ATG12O94817 140 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 IGKV1-39P01597 117 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 IGKV1D-39P04432 117 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 IL6RP08887 468 aaPredicted RBP6.58□□□□□ -1.36
VRK3-211ENST00000596445 FGF2P09038 288 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 OR5AC1P0C628 307 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 EGR2P11161 476 aaPredicted RBP6.58□□□□□ -1.36
VRK3-211ENST00000596445 SLC6A1P30531 599 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 MAS1LP35410 378 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 G6PCP35575 357 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 CRIP2P52943 208 aaPredicted RBP6.58□□□□□ -1.36
VRK3-211ENST00000596445 KRTAP10-3P60369 221 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 UBE2MP61081 183 aaKnown RBP6.58□□□□□ -1.36
VRK3-211ENST00000596445 GNB1P62873 340 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 SSBP2P81877 361 aaPredicted RBP6.58□□□□□ -1.36
VRK3-211ENST00000596445 NDPQ00604 133 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 IFITM3Q01628 133 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 DHODHQ02127 395 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 FXYD3Q14802 87 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 SP6Q3SY56 376 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 TMEM128Q5BJH2 165 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 TMED4Q7Z7H5 227 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 SLC25A42Q86VD7 318 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 CENPSQ8N2Z9 138 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 ABHD5Q8WTS1 349 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 GLYATL2Q8WU03 294 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 ARPC1AQ92747 370 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 TMEM230Q96A57 120 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 GALNT14Q96FL9 552 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 SEC22AQ96IW7 307 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 TMEM140Q9NV12 185 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 LINC00527Q9UJ94 153 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 TBC1D24Q9ULP9 559 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 NUBP2Q9Y5Y2 271 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 TRRAPQ9Y4A5 3859 aa6.58□□□□□ -1.36
VRK3-211ENST00000596445 TET2Q6N021 2002 aaPredicted RBP6.57□□□□□ -1.36
VRK3-211ENST00000596445 VWFP04275 2813 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 TRAV41A0A0B4J266 112 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 PSMB11A5LHX3 300 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 UPK2O00526 184 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 CDS2O95674 445 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 HLA-GP17693 338 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 VDAC1P21796 283 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 RPL8P62917 257 aaKnown RBP6.57□□□□□ -1.36
VRK3-211ENST00000596445 SUPT4H1P63272 117 aaKnown RBP6.57□□□□□ -1.36
VRK3-211ENST00000596445 SLC35B1P78383 322 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 CFHR3Q02985 330 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 TMEM267Q0VDI3 215 aaPredicted RBP6.57□□□□□ -1.36
VRK3-211ENST00000596445 TMEM187Q14656 261 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 TNXAQ16473 311 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 TRIM16LQ309B1 348 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 AKIRIN2Q53H80 203 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 C19orf54Q5BKX5 351 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 SHISA2Q6UWI4 295 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 H2BFWTQ7Z2G1 175 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 ZNF329Q86UD4 541 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 OR5AU1Q8NGC0 362 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 SGMS2Q8NHU3 365 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 GRPEL2Q8TAA5 225 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 RBPMSQ93062 196 aaKnown RBP6.57□□□□□ -1.36
VRK3-211ENST00000596445 TMEM56Q96MV1 263 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 TSC22D3Q99576 134 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 CITED1Q99966 193 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 FLVCR2Q9UPI3 526 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 FBXO7Q9Y3I1 522 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 WSB1Q9Y6I7 421 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 TMEM56-RWDD3S4R434 201 aa6.57□□□□□ -1.36
VRK3-211ENST00000596445 TRAV3A0A0B4J244 114 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 PIGBOS1A0A0B4J2F0 54 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 FAM240BA0A1B0GVZ2 78 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 MSGN1A6NI15 193 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 G3V318 75 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 FBXO24O75426 580 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 SNAPC5O75971 98 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 IGKV1-5P01602 117 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 IGHG4P01861 327 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 TCRBP04435 133 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 ANXA3P12429 323 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 VAMP1P23763 118 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 PPIFP30405 207 aaKnown RBP6.56□□□□□ -1.36
VRK3-211ENST00000596445 AKR1C2P52895 323 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 DEFA1P59665 94 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 DEFA3P59666 94 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 SRPXP78539 464 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 SRSF4Q08170 494 aaKnown RBP6.56□□□□□ -1.36
VRK3-211ENST00000596445 PPP1R1AQ13522 171 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 TEX38Q6PEX7 206 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 C10orf99Q6UWK7 81 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 ZNF695Q8IW36 515 aa6.56□□□□□ -1.36
VRK3-211ENST00000596445 SELENOHQ8IZQ5 122 aaKnown RBP6.56□□□□□ -1.36
VRK3-211ENST00000596445 COMMD1Q8N668 190 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms