RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 VDAC2P45880 294 aaPredicted RBP13.64□□□□□ -0.23
ITGA5-213ENST00000553071 TMEM267Q0VDI3 215 aaPredicted RBP13.64□□□□□ -0.23
ITGA5-213ENST00000553071 PRSS8Q16651 343 aa13.64□□□□□ -0.23
ITGA5-213ENST00000553071 C4orf46Q504U0 113 aa13.64□□□□□ -0.23
ITGA5-213ENST00000553071 OR4A47Q6IF82 309 aa13.64□□□□□ -0.23
ITGA5-213ENST00000553071 H2BFWTQ7Z2G1 175 aa13.64□□□□□ -0.23
ITGA5-213ENST00000553071 NRARPQ7Z6K4 114 aa13.64□□□□□ -0.23
ITGA5-213ENST00000553071 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
ITGA5-213ENST00000553071 ZNF580Q9UK33 172 aa13.64□□□□□ -0.23
ITGA5-213ENST00000553071 FLVCR2Q9UPI3 526 aa13.64□□□□□ -0.23
ITGA5-213ENST00000553071 DUXBA0A1W2PPF3 345 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 MECP2P51608 486 aaKnown RBP13.63□□□□□ -0.23
ITGA5-213ENST00000553071 AKR1C2P52895 323 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 RPL8P62917 257 aaKnown RBP13.63□□□□□ -0.23
ITGA5-213ENST00000553071 SUPT4H1P63272 117 aaKnown RBP13.63□□□□□ -0.23
ITGA5-213ENST00000553071 CX3CL1P78423 397 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 SRSF2Q01130 221 aaKnown RBP13.63□□□□□ -0.23
ITGA5-213ENST00000553071 RELBQ01201 579 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 TMEM187Q14656 261 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 KRTAP24-1Q3LI83 254 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 SSX9Q7RTT3 188 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 LINC01006Q8NI28 216 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 COQ8AQ8NI60 647 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 RNASE11Q8TAA1 199 aaKnown RBP13.63□□□□□ -0.23
ITGA5-213ENST00000553071 SEC22AQ96IW7 307 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 TMEM68Q96MH6 324 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 C19orf24Q9BVV8 132 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 OR51J1Q9H342 316 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 TMEM140Q9NV12 185 aa13.63□□□□□ -0.23
ITGA5-213ENST00000553071 ATRQ13535 2644 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 TRAV6A0A075B6T7 132 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 A0A0B4J2A0 478 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 UPK2O00526 184 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 PRAF2O60831 178 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 DUS4LO95620 317 aaKnown RBP13.62□□□□□ -0.23
ITGA5-213ENST00000553071 DHFRP00374 187 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 CA2P00918 260 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 HLA-AP01891 365 aaKnown RBP13.62□□□□□ -0.23
ITGA5-213ENST00000553071 IGF1P05019 195 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 G6PCP35575 357 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 PPP1R1AQ13522 171 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 FXYD3Q14802 87 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 KRTAP21-3Q3LHN1 58 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 TMEM268Q5VZI3 342 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 LYG2Q86SG7 212 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 VKORC1L1Q8N0U8 176 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 LRTM2Q8N967 370 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 CHPT1Q8WUD6 406 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 LSM10Q969L4 123 aaKnown RBP13.62□□□□□ -0.23
ITGA5-213ENST00000553071 CLCC1Q96S66 551 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 SHPKQ9UHJ6 478 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 PRNDQ9UKY0 176 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 RNF114Q9Y508 228 aa13.62□□□□□ -0.23
ITGA5-213ENST00000553071 IGHV7-81A0A0B4J1V7 117 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 C9orf170A2RU37 121 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 IL5P05113 134 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 IL6RP08887 468 aaPredicted RBP13.61□□□□□ -0.23
ITGA5-213ENST00000553071 ANXA7P20073 488 aaKnown RBP13.61□□□□□ -0.23
ITGA5-213ENST00000553071 VDAC1P21796 283 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 COMPP49747 757 aaPredicted RBP13.61□□□□□ -0.23
ITGA5-213ENST00000553071 SLC35B1P78383 322 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 RGS21Q2M5E4 152 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 SELENOHQ8IZQ5 122 aaKnown RBP13.61□□□□□ -0.23
ITGA5-213ENST00000553071 OR4A16Q8NH70 328 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 RBMXL1Q96E39 390 aaKnown RBP13.61□□□□□ -0.23
ITGA5-213ENST00000553071 SPIN2AQ99865 258 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 SPIN2BQ9BPZ2 258 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 MARVELD1Q9BSK0 173 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 COMMD5Q9GZQ3 224 aa13.61□□□□□ -0.23
ITGA5-213ENST00000553071 ZNF430Q9H8G1 570 aaPredicted RBP13.61□□□□□ -0.23
ITGA5-213ENST00000553071 GPN1Q9HCN4 374 aaPredicted RBP13.61□□□□□ -0.23
ITGA5-213ENST00000553071 INMT-MINDY4F8WBC2 141 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 FCN1O00602 326 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 IGKV1-39P01597 117 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 IGKV1D-39P04432 117 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 HLA-GP17693 338 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 DHRS2Q13268 280 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 TNXAQ16473 311 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 THOC7Q6I9Y2 204 aaKnown RBP13.6□□□□□ -0.23
ITGA5-213ENST00000553071 CENPVQ7Z7K6 275 aaPredicted RBP13.6□□□□□ -0.23
ITGA5-213ENST00000553071 ABHD5Q8WTS1 349 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 CASTOR1Q8WTX7 329 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 ARPC1AQ92747 370 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 PHB2Q99623 299 aa13.6□□□□□ -0.23
ITGA5-213ENST00000553071 SH2D7A6NKC9 451 aaPredicted RBP13.59□□□□□ -0.23
ITGA5-213ENST00000553071 RBMXL2O75526 392 aaKnown RBP13.59□□□□□ -0.23
ITGA5-213ENST00000553071 GNB1P62873 340 aa13.59□□□□□ -0.23
ITGA5-213ENST00000553071 AKIRIN2Q53H80 203 aa13.59□□□□□ -0.23
ITGA5-213ENST00000553071 MRPL41Q8IXM3 137 aaKnown RBP13.59□□□□□ -0.23
ITGA5-213ENST00000553071 COMMD1Q8N668 190 aa13.59□□□□□ -0.23
ITGA5-213ENST00000553071 OR5B3Q8NH48 314 aa13.59□□□□□ -0.23
ITGA5-213ENST00000553071 SGMS2Q8NHU3 365 aa13.59□□□□□ -0.23
ITGA5-213ENST00000553071 HSPB9Q9BQS6 159 aa13.59□□□□□ -0.23
ITGA5-213ENST00000553071 SRSF8Q9BRL6 282 aaKnown RBP13.59□□□□□ -0.23
ITGA5-213ENST00000553071 PARP11Q9NR21 331 aa13.59□□□□□ -0.23
ITGA5-213ENST00000553071 TPSG1Q9NRR2 321 aa13.59□□□□□ -0.23
ITGA5-213ENST00000553071 SERTAD4Q9NUC0 356 aa13.59□□□□□ -0.23
ITGA5-213ENST00000553071 TMED3Q9Y3Q3 217 aa13.59□□□□□ -0.23
ITGA5-213ENST00000553071 IFNA21P01568 189 aa13.58□□□□□ -0.24
ITGA5-213ENST00000553071 MDKP21741 143 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms