RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 OR4A5Q8NH83 315 aa17.27■□□□□ 0.36
TRIM65-202ENST00000540128 MARCH1Q8TCQ1 289 aa17.27■□□□□ 0.36
TRIM65-202ENST00000540128 TMEM68Q96MH6 324 aa17.27■□□□□ 0.36
TRIM65-202ENST00000540128 SDHCQ99643 169 aaPredicted RBP17.27■□□□□ 0.36
TRIM65-202ENST00000540128 BET1LQ9NYM9 111 aa17.27■□□□□ 0.36
TRIM65-202ENST00000540128 TRRAPQ9Y4A5 3859 aa17.27■□□□□ 0.35
TRIM65-202ENST00000540128 KBTBD11O94819 623 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 S1PR2O95136 353 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 PI3P19957 117 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 LPAR6P43657 344 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 PPP5CP53041 499 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 PIGPP57054 158 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 RPL23AP62750 156 aaKnown RBP17.26■□□□□ 0.35
TRIM65-202ENST00000540128 NSUN5P1Q3KNT7 163 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 CXorf66Q5JRM2 361 aaPredicted RBP17.26■□□□□ 0.35
TRIM65-202ENST00000540128 OR4A47Q6IF82 309 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 LFNGQ8NES3 379 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 MYOZ3Q8TDC0 251 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 ABHD5Q8WTS1 349 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 FAM103A1Q9BTL3 118 aaKnown RBP17.26■□□□□ 0.35
TRIM65-202ENST00000540128 HRASLSQ9HDD0 168 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 SCP2D1Q9UJQ7 156 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 GPR132Q9UNW8 380 aa17.26■□□□□ 0.35
TRIM65-202ENST00000540128 SOX15O60248 233 aa17.25■□□□□ 0.35
TRIM65-202ENST00000540128 TSPAN15O95858 294 aa17.25■□□□□ 0.35
TRIM65-202ENST00000540128 FGF2P09038 288 aa17.25■□□□□ 0.35
TRIM65-202ENST00000540128 MAS1LP35410 378 aa17.25■□□□□ 0.35
TRIM65-202ENST00000540128 FAUP35544 74 aaKnown RBP17.25■□□□□ 0.35
TRIM65-202ENST00000540128 GNB1P62873 340 aa17.25■□□□□ 0.35
TRIM65-202ENST00000540128 ECSCRQ19T08 205 aa17.25■□□□□ 0.35
TRIM65-202ENST00000540128 UNQ5815/PRO19632Q6UWF5 114 aa17.25■□□□□ 0.35
TRIM65-202ENST00000540128 GRPEL2Q8TAA5 225 aa17.25■□□□□ 0.35
TRIM65-202ENST00000540128 RTBDNQ9BSG5 229 aaPredicted RBP17.25■□□□□ 0.35
TRIM65-202ENST00000540128 FOXA2Q9Y261 457 aaPredicted RBP17.25■□□□□ 0.35
TRIM65-202ENST00000540128 VWFP04275 2813 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 RPLP1P05386 114 aaKnown RBP17.24■□□□□ 0.35
TRIM65-202ENST00000540128 SLC6A1P30531 599 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 KIAA0141Q14154 515 aaPredicted RBP17.24■□□□□ 0.35
TRIM65-202ENST00000540128 BAK1Q16611 211 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 TREML4Q6UXN2 200 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 SSX9Q7RTT3 188 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 CCDC71LQ8N9Z2 235 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 OR4F17Q8NGA8 305 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 OR5M8Q8NGP6 311 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 SRSF12Q8WXF0 261 aaKnown RBP17.24■□□□□ 0.35
TRIM65-202ENST00000540128 R3HDM4Q96D70 268 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 OR4F4Q96R69 305 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 KLK15Q9H2R5 256 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 C5orf66Q9H5L9 145 aa17.24■□□□□ 0.35
TRIM65-202ENST00000540128 PKD1L1Q8TDX9 2849 aa17.23■□□□□ 0.35
TRIM65-202ENST00000540128 MSGN1A6NI15 193 aa17.23■□□□□ 0.35
TRIM65-202ENST00000540128 UPK2O00526 184 aa17.23■□□□□ 0.35
TRIM65-202ENST00000540128 ACTL6BO94805 426 aa17.23■□□□□ 0.35
TRIM65-202ENST00000540128 CDX1P47902 265 aaPredicted RBP17.23■□□□□ 0.35
TRIM65-202ENST00000540128 TNXAQ16473 311 aa17.23■□□□□ 0.35
TRIM65-202ENST00000540128 ASPHD1Q5U4P2 390 aa17.23■□□□□ 0.35
TRIM65-202ENST00000540128 MCUBQ9NWR8 336 aa17.23■□□□□ 0.35
TRIM65-202ENST00000540128 COPZ2Q9P299 210 aa17.23■□□□□ 0.35
TRIM65-202ENST00000540128 A0A1W2PN81 502 aa17.22■□□□□ 0.35
TRIM65-202ENST00000540128 A0A1W2PRX2 142 aa17.22■□□□□ 0.35
TRIM65-202ENST00000540128 H0Y980 276 aa17.22■□□□□ 0.35
TRIM65-202ENST00000540128 B3GALNT1O75752 331 aa17.22■□□□□ 0.35
TRIM65-202ENST00000540128 BRI3O95415 125 aa17.22■□□□□ 0.35
TRIM65-202ENST00000540128 CHRNA7P36544 502 aa17.22■□□□□ 0.35
TRIM65-202ENST00000540128 RAB9AP51151 201 aa17.22■□□□□ 0.35
TRIM65-202ENST00000540128 RPL8P62917 257 aaKnown RBP17.22■□□□□ 0.35
TRIM65-202ENST00000540128 SCGB3A2Q96PL1 93 aa17.22■□□□□ 0.35
TRIM65-202ENST00000540128 AKIP1Q9NQ31 210 aa17.22■□□□□ 0.35
TRIM65-202ENST00000540128 TMEM140Q9NV12 185 aa17.22■□□□□ 0.35
TRIM65-202ENST00000540128 C14orf166Q9Y224 244 aaKnown RBP17.22■□□□□ 0.35
TRIM65-202ENST00000540128 MARCH11A6NNE9 402 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 RPA2P15927 270 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 HLA-GP17693 338 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 ERVK-16P61578 105 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 KHDC1LQ5JSQ8 128 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 TMEM65Q6PI78 240 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 LCNL1Q6ZST4 164 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 DMBX1Q8NFW5 382 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 SPIN2AQ99865 258 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 SPIN2BQ9BPZ2 258 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 PTTG2Q9NZH5 202 aa17.21■□□□□ 0.35
TRIM65-202ENST00000540128 C3orf85A0A1B0GTC6 90 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 H3BUA1 57 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 KRASP01116 189 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 IGKV1-39P01597 117 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 IGKV1D-39P04432 117 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 SERPINE2P07093 398 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 PF4V1P10720 104 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 ZNF695Q8IW36 515 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 ZNF491Q8N8L2 437 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 FAM110DQ8TAY7 271 aaPredicted RBP17.2■□□□□ 0.34
TRIM65-202ENST00000540128 SEC22AQ96IW7 307 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 UBE2E2Q96LR5 201 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 TP53RKQ96S44 253 aa17.2■□□□□ 0.34
TRIM65-202ENST00000540128 TRAV3A0A0B4J244 114 aa17.19■□□□□ 0.34
TRIM65-202ENST00000540128 G6PCP35575 357 aa17.19■□□□□ 0.34
TRIM65-202ENST00000540128 C10orf55Q5SWW7 151 aa17.19■□□□□ 0.34
TRIM65-202ENST00000540128 TRIQKQ629K1 86 aa17.19■□□□□ 0.34
TRIM65-202ENST00000540128 C18orf65Q6ZTR6 163 aa17.19■□□□□ 0.34
TRIM65-202ENST00000540128 OR5T1Q8NG75 326 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms