RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 IGF2RP11717 2491 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 H3BQ15 152 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 CRYBA1P05813 215 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 GRNP28799 593 aaKnown RBP18.41■□□□□ 0.54
PCDH1-204ENST00000503492 RPP30P78346 268 aaKnown RBP18.41■□□□□ 0.54
PCDH1-204ENST00000503492 FLI1Q01543 452 aaPredicted RBP18.41■□□□□ 0.54
PCDH1-204ENST00000503492 KLRB1Q12918 225 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 FFAR4Q5NUL3 377 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 HEPN1Q6WQI6 88 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 ABHD12Q8N2K0 398 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 TMEM170AQ8WVE7 144 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 H1FXQ92522 213 aaKnown RBP18.41■□□□□ 0.54
PCDH1-204ENST00000503492 MLXQ9UH92 298 aa18.41■□□□□ 0.54
PCDH1-204ENST00000503492 EFNB3Q15768 340 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 POU2AF1Q16633 256 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 Q8N7P7 452 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 LHX4Q969G2 390 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 ISOC2Q96AB3 205 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 TMEM14BQ9NUH8 114 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 FOXA2Q9Y261 457 aaPredicted RBP18.4■□□□□ 0.54
PCDH1-204ENST00000503492 CCL21O00585 134 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 NDUFB3O43676 98 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 CD1BP29016 333 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 TUBA4BQ9H853 241 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 SLC25A22Q9H936 323 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 WDR83OSQ9Y284 106 aa18.4■□□□□ 0.54
PCDH1-204ENST00000503492 PRSS46E5RG02 174 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 HOXA1P49639 335 aaPredicted RBP18.39■□□□□ 0.53
PCDH1-204ENST00000503492 FBXL19-AS1Q494R0 122 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 ZNF709Q8N972 641 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 OR10G4Q8NGN3 311 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 OR10G9Q8NGN4 311 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 OR10G7Q8NGN6 311 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 SLC35D1Q9NTN3 355 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 B9A039 149 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 HRASP01112 189 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 MBP02144 154 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 IGKV1-16P04430 117 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 LRRC10Q5BKY1 277 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 AVPI1Q5T686 147 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 ZNF833PQ6ZTB9 187 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 ST6GALNAC3Q8NDV1 305 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 HIST1H2BAQ96A08 127 aa18.39■□□□□ 0.53
PCDH1-204ENST00000503492 DVL1O14640 695 aa18.38■□□□□ 0.53
PCDH1-204ENST00000503492 HMGB3O15347 200 aaKnown RBP18.38■□□□□ 0.53
PCDH1-204ENST00000503492 MYOD1P15172 320 aa18.38■□□□□ 0.53
PCDH1-204ENST00000503492 HSPE1P61604 102 aaKnown RBP18.38■□□□□ 0.53
PCDH1-204ENST00000503492 OR13D1Q8NGV5 346 aa18.38■□□□□ 0.53
PCDH1-204ENST00000503492 RAB39BQ96DA2 213 aa18.38■□□□□ 0.53
PCDH1-204ENST00000503492 CTXND1A0A1B0GTU2 59 aa18.38■□□□□ 0.53
PCDH1-204ENST00000503492 A0A1W2PPE2 198 aa18.38■□□□□ 0.53
PCDH1-204ENST00000503492 IL6RP08887 468 aaPredicted RBP18.38■□□□□ 0.53
PCDH1-204ENST00000503492 CTRB1P17538 263 aa18.38■□□□□ 0.53
PCDH1-204ENST00000503492 CHRNB4P30926 498 aa18.38■□□□□ 0.53
PCDH1-204ENST00000503492 CTRB2Q6GPI1 263 aa18.38■□□□□ 0.53
PCDH1-204ENST00000503492 CA5BP1Q8WTZ4 195 aa18.38■□□□□ 0.53
PCDH1-204ENST00000503492 IGHV1-69-2A0A0G2JMI3 117 aa18.37■□□□□ 0.53
PCDH1-204ENST00000503492 SRRM4A7MD48 611 aaKnown RBP18.37■□□□□ 0.53
PCDH1-204ENST00000503492 C17orf112F2Z3M2 114 aa18.37■□□□□ 0.53
PCDH1-204ENST00000503492 SIAH2O43255 324 aa18.37■□□□□ 0.53
PCDH1-204ENST00000503492 RAB11AP62491 216 aa18.37■□□□□ 0.53
PCDH1-204ENST00000503492 FAM90A2PQ658T7 463 aa18.37■□□□□ 0.53
PCDH1-204ENST00000503492 KAAG1Q9UBP8 84 aa18.37■□□□□ 0.53
PCDH1-204ENST00000503492 A0A1W2PPH5 198 aa18.37■□□□□ 0.53
PCDH1-204ENST00000503492 LOXP28300 417 aaPredicted RBP18.37■□□□□ 0.53
PCDH1-204ENST00000503492 PMS2P11Q13670 270 aa18.37■□□□□ 0.53
PCDH1-204ENST00000503492 RTL8BQ17RB0 113 aa18.37■□□□□ 0.53
PCDH1-204ENST00000503492 VAX2Q9UIW0 290 aa18.37■□□□□ 0.53
PCDH1-204ENST00000503492 CDSNQ15517 529 aa18.36■□□□□ 0.53
PCDH1-204ENST00000503492 MRPL20Q9BYC9 149 aaKnown RBP18.36■□□□□ 0.53
PCDH1-204ENST00000503492 TMPRSS5Q9H3S3 457 aa18.36■□□□□ 0.53
PCDH1-204ENST00000503492 SMCO3A2RU48 225 aa18.35■□□□□ 0.53
PCDH1-204ENST00000503492 TREML4Q6UXN2 200 aa18.35■□□□□ 0.53
PCDH1-204ENST00000503492 NIPSNAP3BQ9BS92 247 aa18.35■□□□□ 0.53
PCDH1-204ENST00000503492 GGACTQ9BVM4 153 aa18.35■□□□□ 0.53
PCDH1-204ENST00000503492 ACTR3CQ9C0K3 210 aaPredicted RBP18.35■□□□□ 0.53
PCDH1-204ENST00000503492 SPTA1P02549 2419 aa18.35■□□□□ 0.53
PCDH1-204ENST00000503492 DEFA4P12838 97 aa18.35■□□□□ 0.53
PCDH1-204ENST00000503492 TVP23CQ96ET8 276 aa18.35■□□□□ 0.53
PCDH1-204ENST00000503492 OR51B2Q9Y5P1 312 aa18.35■□□□□ 0.53
PCDH1-204ENST00000503492 UPK2O00526 184 aa18.34■□□□□ 0.53
PCDH1-204ENST00000503492 IFNA1P01562 189 aa18.34■□□□□ 0.53
PCDH1-204ENST00000503492 FOLR2P14207 255 aa18.34■□□□□ 0.53
PCDH1-204ENST00000503492 DLK1P80370 383 aa18.34■□□□□ 0.53
PCDH1-204ENST00000503492 ADORA2A-AS1P86434 159 aa18.34■□□□□ 0.53
PCDH1-204ENST00000503492 RAB24Q969Q5 203 aa18.34■□□□□ 0.53
PCDH1-204ENST00000503492 IFNA4P05014 189 aa18.34■□□□□ 0.53
PCDH1-204ENST00000503492 DLX6P56179 175 aa18.34■□□□□ 0.53
PCDH1-204ENST00000503492 P2RX4Q99571 388 aa18.34■□□□□ 0.53
PCDH1-204ENST00000503492 PRNDQ9UKY0 176 aa18.34■□□□□ 0.53
PCDH1-204ENST00000503492 MT-ND4LP03901 98 aa18.33■□□□□ 0.53
PCDH1-204ENST00000503492 TAGLN2P37802 199 aaKnown RBP18.33■□□□□ 0.53
PCDH1-204ENST00000503492 SLC24A4Q8NFF2 622 aa18.33■□□□□ 0.53
PCDH1-204ENST00000503492 NPY1RP25929 384 aa18.33■□□□□ 0.52
PCDH1-204ENST00000503492 ACOT6Q3I5F7 207 aaPredicted RBP18.33■□□□□ 0.52
PCDH1-204ENST00000503492 RBMS3Q6XE24 437 aaKnown RBP18.33■□□□□ 0.52
PCDH1-204ENST00000503492 SLC35E3Q7Z769 313 aa18.33■□□□□ 0.52
PCDH1-204ENST00000503492 HINT2Q9BX68 163 aa18.33■□□□□ 0.52
PCDH1-204ENST00000503492 LYNX1G3V0Z9 82 aa18.32■□□□□ 0.52
PCDH1-204ENST00000503492 H0YJW9 148 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms