RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 FAM71F2Q6NXP2 309 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 TMEM65Q6PI78 240 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 C10orf99Q6UWK7 81 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 KCTD9Q7L273 389 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 FOXRED2Q8IWF2 684 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 H1FOOQ8IZA3 346 aaPredicted RBP10.42□□□□□ -0.74
ERCC3-209ENST00000494464 LRTM2Q8N967 370 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 Q8N9W7 124 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 KCNIP3Q9Y2W7 256 aa10.42□□□□□ -0.74
ERCC3-209ENST00000494464 TCRBV4S1A1TA0A5B7 111 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 G3V4G9 280 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 CCSO14618 274 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 BET1O15155 118 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 RPA2P15927 270 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 ZNF833PQ6ZTB9 187 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 ZNF767PQ75MW2 155 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 C5orf24Q7Z6I8 188 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 C1QL4Q86Z23 238 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 FAM71E2Q8N5Q1 922 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 IFI27L2Q9H2X8 130 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 COMMD9Q9P000 198 aa10.41□□□□□ -0.74
ERCC3-209ENST00000494464 A0A1W2PRX2 142 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 NCBP2LA6PVI3 153 aaKnown RBP10.4□□□□□ -0.74
ERCC3-209ENST00000494464 AP4M1O00189 453 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 GPR31O00270 319 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 ITGB1BP1O14713 200 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 PF4V1P10720 104 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 GPR12P47775 334 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 SRPXP78539 464 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 TMEM187Q14656 261 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 NDUFA5Q16718 116 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 C11orf87Q6NUJ2 197 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 STPG2Q8N412 459 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 COMMD1Q8N668 190 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 OR10J5Q8NHC4 309 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 PPP1R1CQ8WVI7 109 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 IL1F10Q8WWZ1 152 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 NOL4LQ96MY1 436 aaPredicted RBP10.4□□□□□ -0.74
ERCC3-209ENST00000494464 S1PR3Q99500 378 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 TOLLIPQ9H0E2 274 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 OR2W1Q9Y3N9 320 aa10.4□□□□□ -0.74
ERCC3-209ENST00000494464 FXYD6-FXYD2A0A087WZ82 144 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 SAA2-SAA4A0A096LPE2 208 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 C5orf51A6NDU8 294 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 FAM25EA8MYX2 175 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 L7N2F9 121 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 B3GALNT1O75752 331 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 SAA2P0DJI9 122 aaPredicted RBP10.39□□□□□ -0.75
ERCC3-209ENST00000494464 CXCL2P19875 107 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 GNRHRP30968 328 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 SLC35B1P78383 322 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 ZNF345Q14585 488 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 PHLDA2Q53GA4 152 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 KHDC1LQ5JSQ8 128 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 WFDC9Q8NEX5 89 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 NABP2Q9BQ15 211 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 MRPL20Q9BYC9 149 aaKnown RBP10.39□□□□□ -0.75
ERCC3-209ENST00000494464 SLC5A7Q9GZV3 580 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 ZNF580Q9UK33 172 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 IGKV1D-13A0A0B4J2D9 117 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 PIGBOS1A0A0B4J2F0 54 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 MPPED1O15442 326 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 ARPC5O15511 151 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 ADAP1O75689 374 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 PF4P02776 101 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 OR5AC1P0C628 307 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 IGKV1-13P0DP09 117 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 OPCMLQ14982 345 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 ZNF329Q86UD4 541 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 CMTM1Q8IZ96 169 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 LGI3Q8N145 548 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 BVESQ8NE79 360 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 SECTM1Q8WVN6 248 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 EDARADDQ8WWZ3 215 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 C2orf50Q96LR7 162 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 RASL11BQ9BPW5 248 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 ZNF251Q9BRH9 671 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 ZFP57Q9NU63 452 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 TNFSF18Q9UNG2 199 aa10.39□□□□□ -0.75
ERCC3-209ENST00000494464 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 C13orf42A0A1B0GVH6 325 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 DUXBA0A1W2PPF3 345 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 RAB29O14966 203 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 ST8SIA5O15466 376 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 MPC2O95563 127 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 IFNA21P01568 189 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 PET100P0DJ07 73 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 LYL1P12980 280 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 CD33P20138 364 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 PSMB6P28072 239 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 S100GP29377 79 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 S100A11P31949 105 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 F2RL1P55085 397 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 RPL23AP62750 156 aaKnown RBP10.38□□□□□ -0.75
ERCC3-209ENST00000494464 IL15RAQ13261 267 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 OR2F1Q13607 317 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 MMDQ15546 238 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 MSMO1Q15800 293 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 ZNF818PQ6ZRF7 136 aa10.38□□□□□ -0.75
ERCC3-209ENST00000494464 SEC22AQ96IW7 307 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms