RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 GNB1P62873 340 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 TMEM267Q0VDI3 215 aaPredicted RBP15.88■□□□□ 0.13
SKA3-205ENST00000465471 CNPY1Q3B7I2 92 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 OR4A47Q6IF82 309 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 TREML4Q6UXN2 200 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 CADM3Q8N126 398 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 GDPD1Q8N9F7 314 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 OR51S1Q8NGJ8 323 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 GRPEL2Q8TAA5 225 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 ZFAND1Q8TCF1 268 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 MARCH1Q8TCQ1 289 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 DEDD2Q8WXF8 326 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 SDHCQ99643 169 aaPredicted RBP15.88■□□□□ 0.13
SKA3-205ENST00000465471 ZFP57Q9NU63 452 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 FOXA2Q9Y261 457 aaPredicted RBP15.88■□□□□ 0.13
SKA3-205ENST00000465471 MPPED1O15442 326 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 CNIH1O95406 144 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 CTSDP07339 412 aaPredicted RBP15.87■□□□□ 0.13
SKA3-205ENST00000465471 PI3P19957 117 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 PIGPP57054 158 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 AP3S2P59780 193 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 TNXAQ16473 311 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 CXorf66Q5JRM2 361 aaPredicted RBP15.87■□□□□ 0.13
SKA3-205ENST00000465471 ASPHD1Q5U4P2 390 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 UNQ5815/PRO19632Q6UWF5 114 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 LINC00299Q6ZSB3 139 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 LCNL1Q6ZST4 164 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 TOMM5Q8N4H5 51 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 LFNGQ8NES3 379 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 OR4A5Q8NH83 315 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 ABHD5Q8WTS1 349 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 SRSF12Q8WXF0 261 aaKnown RBP15.87■□□□□ 0.13
SKA3-205ENST00000465471 BATF3Q9NR55 127 aa15.87■□□□□ 0.13
SKA3-205ENST00000465471 NBEAL1Q6ZS30 2694 aa15.86■□□□□ 0.13
SKA3-205ENST00000465471 A0A1W2PRX2 142 aa15.86■□□□□ 0.13
SKA3-205ENST00000465471 FGF2P09038 288 aa15.86■□□□□ 0.13
SKA3-205ENST00000465471 LPAR6P43657 344 aa15.86■□□□□ 0.13
SKA3-205ENST00000465471 KIAA0141Q14154 515 aaPredicted RBP15.86■□□□□ 0.13
SKA3-205ENST00000465471 SSX9Q7RTT3 188 aa15.86■□□□□ 0.13
SKA3-205ENST00000465471 OR5M8Q8NGP6 311 aa15.86■□□□□ 0.13
SKA3-205ENST00000465471 R3HDM4Q96D70 268 aa15.86■□□□□ 0.13
SKA3-205ENST00000465471 TMEM68Q96MH6 324 aa15.86■□□□□ 0.13
SKA3-205ENST00000465471 HRASLSQ9HDD0 168 aa15.86■□□□□ 0.13
SKA3-205ENST00000465471 GPR132Q9UNW8 380 aa15.86■□□□□ 0.13
SKA3-205ENST00000465471 A0A1W2PN81 502 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 MARCH11A6NNE9 402 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 H0Y980 276 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 SLC6A1P30531 599 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 MAS1LP35410 378 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 CHRNA7P36544 502 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 CDX1P47902 265 aaPredicted RBP15.85■□□□□ 0.13
SKA3-205ENST00000465471 ZNF45Q02386 682 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 BAK1Q16611 211 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 KHDC1LQ5JSQ8 128 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 C18orf65Q6ZTR6 163 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 OR4F17Q8NGA8 305 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 OR4F4Q96R69 305 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 RTBDNQ9BSG5 229 aaPredicted RBP15.85■□□□□ 0.13
SKA3-205ENST00000465471 KLK15Q9H2R5 256 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 C5orf66Q9H5L9 145 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 TMEM140Q9NV12 185 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 SCP2D1Q9UJQ7 156 aa15.85■□□□□ 0.13
SKA3-205ENST00000465471 IGKV1-39P01597 117 aa15.84■□□□□ 0.13
SKA3-205ENST00000465471 IGKV1D-39P04432 117 aa15.84■□□□□ 0.13
SKA3-205ENST00000465471 FAUP35544 74 aaKnown RBP15.84■□□□□ 0.13
SKA3-205ENST00000465471 RPL8P62917 257 aaKnown RBP15.84■□□□□ 0.13
SKA3-205ENST00000465471 C10orf55Q5SWW7 151 aa15.84■□□□□ 0.13
SKA3-205ENST00000465471 CCDC71LQ8N9Z2 235 aa15.84■□□□□ 0.13
SKA3-205ENST00000465471 AKIP1Q9NQ31 210 aa15.84■□□□□ 0.13
SKA3-205ENST00000465471 A0A1B0GW64 132 aa15.83■□□□□ 0.12
SKA3-205ENST00000465471 MSGN1A6NI15 193 aa15.83■□□□□ 0.12
SKA3-205ENST00000465471 UPK2O00526 184 aa15.83■□□□□ 0.12
SKA3-205ENST00000465471 BRI3O95415 125 aa15.83■□□□□ 0.12
SKA3-205ENST00000465471 RAB9AP51151 201 aa15.83■□□□□ 0.12
SKA3-205ENST00000465471 DMBX1Q8NFW5 382 aa15.83■□□□□ 0.12
SKA3-205ENST00000465471 FAM110DQ8TAY7 271 aaPredicted RBP15.83■□□□□ 0.12
SKA3-205ENST00000465471 TP53RKQ96S44 253 aa15.83■□□□□ 0.12
SKA3-205ENST00000465471 MCUBQ9NWR8 336 aa15.83■□□□□ 0.12
SKA3-205ENST00000465471 PTTG2Q9NZH5 202 aa15.83■□□□□ 0.12
SKA3-205ENST00000465471 COPZ2Q9P299 210 aa15.83■□□□□ 0.12
SKA3-205ENST00000465471 TRAV3A0A0B4J244 114 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 TEX22C9J3V5 150 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 H3BUA1 57 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 ACTL6BO94805 426 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 PF4V1P10720 104 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 HLA-GP17693 338 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 ERVK-16P61578 105 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 ETV3LQ6ZN32 361 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 ZNF695Q8IW36 515 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 ZNF491Q8N8L2 437 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 SEC22AQ96IW7 307 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 UBE2E2Q96LR5 201 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 SPIN2AQ99865 258 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 SPIN2BQ9BPZ2 258 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 C14orf166Q9Y224 244 aaKnown RBP15.82■□□□□ 0.12
SKA3-205ENST00000465471 VSIG4Q9Y279 399 aa15.82■□□□□ 0.12
SKA3-205ENST00000465471 C3orf85A0A1B0GTC6 90 aa15.81■□□□□ 0.12
SKA3-205ENST00000465471 E7EUB6 86 aa15.81■□□□□ 0.12
SKA3-205ENST00000465471 B3GALNT1O75752 331 aa15.81■□□□□ 0.12
SKA3-205ENST00000465471 KRASP01116 189 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms