RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 GFI1BQ5VTD9 330 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 B4E171 279 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 NPPCP23582 126 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 FAM27E3Q08E93 113 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 Q96M66 194 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 TRBV5-7A0A0A0MS05 114 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 LAMTOR1Q6IAA8 161 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 FAM159AQ6UWV7 190 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 KCNS1Q96KK3 526 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 FBXL15Q9H469 300 aa16.72■□□□□ 0.27
SNX27-204ENST00000458013 IGKV1D-33P01593 117 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 IGKV1-33P01594 117 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 LHX2P50458 406 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 IFITM2Q01629 132 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 WDR82Q6UXN9 313 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 SPSB4Q96A44 273 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 RNF115Q9Y4L5 304 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 RPS11P62280 158 aaKnown RBP eCLIP16.71■□□□□ 0.27
SNX27-204ENST00000458013 PCOLCEQ15113 449 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 OR10AG1Q8NH19 301 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 GALNT14Q96FL9 552 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 ATAD5Q96QE3 1844 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 MYO7AQ13402 2215 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 PIKFYVEQ9Y2I7 2098 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 HLA-DQA1P01909 254 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 SCARF2Q96GP6 870 aaPredicted RBP16.71■□□□□ 0.27
SNX27-204ENST00000458013 COL25A1Q9BXS0 654 aaPredicted RBP16.71■□□□□ 0.27
SNX27-204ENST00000458013 TOMM7Q9P0U1 55 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 RGPD3A6NKT7 1758 aaPredicted RBP16.71■□□□□ 0.27
SNX27-204ENST00000458013 A0A1B0GV72 72 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 AHRRA9YTQ3 701 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 FCARP24071 287 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 ZNF600Q6ZNG1 722 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 CLEC7AQ9BXN2 247 aa16.71■□□□□ 0.27
SNX27-204ENST00000458013 IGKV1D-43A0A0B4J1Z2 117 aa16.71■□□□□ 0.26
SNX27-204ENST00000458013 TRAV24A0A0B4J272 114 aa16.71■□□□□ 0.26
SNX27-204ENST00000458013 COL18A1P39060 1754 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 HLA-DRB1P01911 266 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 TSPAN7P41732 249 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 MRPL16Q9NX20 251 aaKnown RBP16.7■□□□□ 0.26
SNX27-204ENST00000458013 PILRBQ9UKJ0 227 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 CYP2G1PQ6ZSU1 146 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 NPIPB11E5RHQ5 1161 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 TYMSP04818 313 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 CLEC19AQ6UXS0 136 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 FAM19A2Q8N3H0 131 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 GGACTQ9BVM4 153 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 CD24P25063 80 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 IGHV3-11P01762 117 aa16.7■□□□□ 0.26
SNX27-204ENST00000458013 A0A1W2PQM1 296 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 ZP1P60852 638 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 CIRBPQ14011 172 aaKnown RBP16.69■□□□□ 0.26
SNX27-204ENST00000458013 FDCSPQ8NFU4 85 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 SAP25Q8TEE9 199 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 SP9P0CG40 484 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 SMIM13P0DJ93 91 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 GNG5P63218 68 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 SMAGPQ0VAQ4 97 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 OR5P3Q8WZ94 311 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 TMEM54Q969K7 222 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 CEACAM4O75871 244 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 CELA3BP08861 270 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 PDLIM4P50479 330 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 AQP10Q96PS8 301 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 DUX3Q96PT4 197 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 TRAV12-3A0A0B4J271 114 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 ATP5G3P48201 142 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 TMEM95Q3KNT9 176 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 ALX4Q9H161 411 aaPredicted RBP16.69■□□□□ 0.26
SNX27-204ENST00000458013 TUBA4BQ9H853 241 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 P2RY6Q15077 328 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 C2orf68Q2NKX9 166 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 HIST1H2BAQ96A08 127 aa16.69■□□□□ 0.26
SNX27-204ENST00000458013 SAA1P0DJI8 122 aaPredicted RBP16.68■□□□□ 0.26
SNX27-204ENST00000458013 APOHP02749 345 aaPredicted RBP16.68■□□□□ 0.26
SNX27-204ENST00000458013 FHL5Q5TD97 284 aa16.68■□□□□ 0.26
SNX27-204ENST00000458013 C1orf53Q5VUE5 145 aa16.68■□□□□ 0.26
SNX27-204ENST00000458013 LEMD1Q68G75 181 aa16.68■□□□□ 0.26
SNX27-204ENST00000458013 DICER1Q9UPY3 1922 aaKnown RBP16.68■□□□□ 0.26
SNX27-204ENST00000458013 EGR4Q05215 589 aa16.68■□□□□ 0.26
SNX27-204ENST00000458013 POC1AQ8NBT0 407 aa16.68■□□□□ 0.26
SNX27-204ENST00000458013 PGPEP1Q9NXJ5 209 aa16.68■□□□□ 0.26
SNX27-204ENST00000458013 PMCHL1Q16048 86 aa16.68■□□□□ 0.26
SNX27-204ENST00000458013 FAM71F2Q6NXP2 309 aa16.68■□□□□ 0.26
SNX27-204ENST00000458013 TMEM70Q9BUB7 260 aa16.68■□□□□ 0.26
SNX27-204ENST00000458013 DANCRP0C864 163 aa16.68■□□□□ 0.26
SNX27-204ENST00000458013 TCF23Q7RTU1 214 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 KIR3DL3Q8N743 410 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 SCN8AQ9UQD0 1980 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 CCDC88CQ9P219 2028 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 GPR183P32249 361 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 SNRPD3P62318 126 aaKnown RBP16.67■□□□□ 0.26
SNX27-204ENST00000458013 PMCHL2Q9BQD1 86 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 JPT1Q9UK76 154 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 ZNF146Q15072 292 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 FAM216BQ8N7L0 139 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 C17orf98A8MV24 154 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 MT-ND6P03923 174 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 C12orf54Q6X4T0 127 aa16.67■□□□□ 0.26
SNX27-204ENST00000458013 RNASEH2CQ8TDP1 164 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms