RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 PRB3Q04118 309 aaPredicted RBP7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 TLE4Q04727 773 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 RTL8BQ17RB0 113 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 OR10A7Q8NGE5 316 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 WDR61Q9GZS3 305 aaKnown RBP7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 RAB1BQ9H0U4 201 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 VSIRQ9H7M9 311 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 KAAG1Q9UBP8 84 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 HRASP01112 189 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 MYOD1P15172 320 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 S100PP25815 95 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 DLX1P56177 255 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 AKIRIN2Q53H80 203 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 COMMD1Q8N668 190 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 OR13D1Q8NGV5 346 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 TAF15Q92804 592 aaKnown RBP eCLIP7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 PINX1Q96BK5 328 aaKnown RBP7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 RARRES2Q99969 163 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 PBDC1Q9BVG4 233 aa7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 MRPL20Q9BYC9 149 aaKnown RBP7.79□□□□□ -1.16
COL6A4P1-201ENST00000446690 YLPM1P49750 1951 aaKnown RBP7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 COL6A6A6NMZ7 2263 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 USF3Q68DE3 2245 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 FAM90A9PA6NNJ1 464 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 PMS2P5A8MQ11 134 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 SOD3P08294 240 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 OR8U8P0C7N1 319 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 FGF7P21781 194 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 DIAPH2-AS1Q14236 149 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 HAGHQ16775 308 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 ABHD12Q8N2K0 398 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 RAB39BQ96DA2 213 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 TMEM204Q9BSN7 226 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 RPRMQ9NS64 109 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 NBASA2RRP1 2371 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 SMCO3A2RU48 225 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 SRRM4A7MD48 611 aaKnown RBP7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 C15orf62A8K5M9 175 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 J3QR06 171 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 PPIHO43447 177 aaKnown RBP7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 PPOXP50336 477 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 RAB2AP61019 212 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 RPP30P78346 268 aaKnown RBP7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 SPSB3Q6PJ21 355 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 TMEM147Q9BVK8 224 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 CBLN4Q9NTU7 201 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 TCF19Q9Y242 345 aa7.78□□□□□ -1.16
COL6A4P1-201ENST00000446690 C15orf61A6NNL5 157 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 RRHO14718 337 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 OR13C7P0DN81 318 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 IGHV1-8P0DP01 117 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 PAX6P26367 422 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 PLA2G5P39877 138 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 CEBPGP53567 150 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 GNB2P62879 340 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 ATP6V1FQ16864 119 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 TMEM155Q4W5P6 130 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 LCN15Q6UWW0 184 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 ZNF833PQ6ZTB9 187 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 LFNGQ8NES3 379 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 ENY2Q9NPA8 101 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 RBFOX3A6NFN3 312 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 C1orf196B1AJZ1 125 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 APOA2P02652 100 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 FBP1P09467 338 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 FGF8P55075 233 aaPredicted RBP7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 SERF2P84101 59 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 DPPA3Q6W0C5 159 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 ETV3LQ6ZN32 361 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 C15orf54Q8N8G6 183 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 OR52E5Q8NH55 327 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 TCEAL7Q9BRU2 100 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 PSMG3Q9BT73 122 aaPredicted RBP7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 SCRT1Q9BWW7 348 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 OR51B2Q9Y5P1 312 aa7.77□□□□□ -1.17
COL6A4P1-201ENST00000446690 FAM157AC9JC47 383 aa7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 VDAC2P45880 294 aaPredicted RBP7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 DLX6P56179 175 aa7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 HSPE1P61604 102 aaKnown RBP7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 FABP9Q0Z7S8 132 aa7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 AARDQ4LEZ3 155 aa7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 ZNF841Q6ZN19 808 aa7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 ZNF429Q86V71 674 aa7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 ZNF709Q8N972 641 aa7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 OR9G1Q8NH87 305 aa7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 HIST1H2BAQ96A08 127 aa7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 FLYWCH2Q96CP2 140 aaKnown RBP7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 HARBI1Q96MB7 349 aa7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 METTL1Q9UBP6 276 aaKnown RBP7.76□□□□□ -1.17
COL6A4P1-201ENST00000446690 PPIAL4CA0A0B4J2A2 164 aa7.75□□□□□ -1.17
COL6A4P1-201ENST00000446690 H0YJW9 148 aa7.75□□□□□ -1.17
COL6A4P1-201ENST00000446690 HMGB3O15347 200 aaKnown RBP7.75□□□□□ -1.17
COL6A4P1-201ENST00000446690 ENSAO43768 121 aaKnown RBP7.75□□□□□ -1.17
COL6A4P1-201ENST00000446690 HBE1P02100 147 aa7.75□□□□□ -1.17
COL6A4P1-201ENST00000446690 PPIAL4GP0DN37 164 aa7.75□□□□□ -1.17
COL6A4P1-201ENST00000446690 AGAP20933 346 aa7.75□□□□□ -1.17
COL6A4P1-201ENST00000446690 CD1BP29016 333 aa7.75□□□□□ -1.17
COL6A4P1-201ENST00000446690 RNF212Q495C1 297 aa7.75□□□□□ -1.17
COL6A4P1-201ENST00000446690 C4orf17Q53FE4 359 aa7.75□□□□□ -1.17
COL6A4P1-201ENST00000446690 TMEM41BQ5BJD5 291 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms