RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 H1FXQ92522 213 aaKnown RBP16.46■□□□□ 0.23
USP39-204ENST00000409766 NPCDR1Q9BY65 106 aa16.46■□□□□ 0.23
USP39-204ENST00000409766 FOXA2Q9Y261 457 aaPredicted RBP16.46■□□□□ 0.23
USP39-204ENST00000409766 ANKHD1Q8IWZ3 2542 aaKnown RBP16.46■□□□□ 0.23
USP39-204ENST00000409766 LOC102723971A0A1B0GUV8 181 aa16.46■□□□□ 0.23
USP39-204ENST00000409766 C7orf77A4D0Y5 90 aa16.46■□□□□ 0.23
USP39-204ENST00000409766 IFNA10P01566 189 aa16.46■□□□□ 0.23
USP39-204ENST00000409766 AKIRIN2Q53H80 203 aa16.46■□□□□ 0.23
USP39-204ENST00000409766 UNQ6494/PRO21346Q6UXR6 183 aa16.46■□□□□ 0.23
USP39-204ENST00000409766 UNKLQ9H9P5 680 aaKnown RBP16.46■□□□□ 0.23
USP39-204ENST00000409766 RPS10P5Q9NQ39 176 aa16.46■□□□□ 0.23
USP39-204ENST00000409766 SMCO4Q9NRQ5 59 aa16.46■□□□□ 0.23
USP39-204ENST00000409766 GNG13Q9P2W3 67 aa16.46■□□□□ 0.23
USP39-204ENST00000409766 CHD8Q9HCK8 2581 aa16.46■□□□□ 0.23
USP39-204ENST00000409766 RRHO14718 337 aa16.45■□□□□ 0.22
USP39-204ENST00000409766 IL6RP08887 468 aaPredicted RBP16.45■□□□□ 0.22
USP39-204ENST00000409766 LOXP28300 417 aaPredicted RBP16.45■□□□□ 0.22
USP39-204ENST00000409766 AKR1C3P42330 323 aa16.45■□□□□ 0.22
USP39-204ENST00000409766 FGF8P55075 233 aaPredicted RBP16.45■□□□□ 0.22
USP39-204ENST00000409766 M0R036 132 aa16.45■□□□□ 0.22
USP39-204ENST00000409766 NDUFA2O43678 99 aa16.45■□□□□ 0.22
USP39-204ENST00000409766 IGKV1-16P04430 117 aa16.45■□□□□ 0.22
USP39-204ENST00000409766 SNRNP70P08621 437 aaKnown RBP16.45■□□□□ 0.22
USP39-204ENST00000409766 FBP1P09467 338 aa16.45■□□□□ 0.22
USP39-204ENST00000409766 C20orf24Q9BUV8 137 aa16.45■□□□□ 0.22
USP39-204ENST00000409766 SLC35D1Q9NTN3 355 aa16.45■□□□□ 0.22
USP39-204ENST00000409766 MAP1LC3B2A6NCE7 125 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 PRSS46E5RG02 174 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 CD1BP29016 333 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 HSPE1P61604 102 aaKnown RBP16.44■□□□□ 0.22
USP39-204ENST00000409766 RTL8BQ17RB0 113 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 ABHD12Q8N2K0 398 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 MUC15Q8N387 334 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 CYB561D1Q8N8Q1 229 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 OR13D1Q8NGV5 346 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 TMEM170AQ8WVE7 144 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 MAP1LC3BQ9GZQ8 125 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 WDR83OSQ9Y284 106 aa16.44■□□□□ 0.22
USP39-204ENST00000409766 MBP02144 154 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 BCL2P10415 239 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 HOXA1P49639 335 aaPredicted RBP16.43■□□□□ 0.22
USP39-204ENST00000409766 Q8N7P7 452 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 SRRM4A7MD48 611 aaKnown RBP16.43■□□□□ 0.22
USP39-204ENST00000409766 H7C2Y5 167 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 DLX6P56179 175 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 RHEBQ15382 184 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 ZNF672Q499Z4 452 aaPredicted RBP16.43■□□□□ 0.22
USP39-204ENST00000409766 FFAR4Q5NUL3 377 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 ZNF709Q8N972 641 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 OR10G4Q8NGN3 311 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 GGACTQ9BVM4 153 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 SLC39A9Q9NUM3 307 aa16.43■□□□□ 0.22
USP39-204ENST00000409766 PUS1Q9Y606 427 aaKnown RBP eCLIP16.43■□□□□ 0.22
USP39-204ENST00000409766 ZFP92A6NM28 416 aa16.42■□□□□ 0.22
USP39-204ENST00000409766 COLCA2A8K830 154 aa16.42■□□□□ 0.22
USP39-204ENST00000409766 PAX6P26367 422 aa16.42■□□□□ 0.22
USP39-204ENST00000409766 PLA2G5P39877 138 aa16.42■□□□□ 0.22
USP39-204ENST00000409766 PMS2P11Q13670 270 aa16.42■□□□□ 0.22
USP39-204ENST00000409766 C8orf31Q8N9H6 132 aa16.42■□□□□ 0.22
USP39-204ENST00000409766 ZNF596Q8TC21 504 aa16.42■□□□□ 0.22
USP39-204ENST00000409766 NBASA2RRP1 2371 aa16.42■□□□□ 0.22
USP39-204ENST00000409766 CACNA1AO00555 2505 aa16.42■□□□□ 0.22
USP39-204ENST00000409766 C17orf112F2Z3M2 114 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 TMEM155Q4W5P6 130 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 OR10G9Q8NGN4 311 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 OR10G7Q8NGN6 311 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 CA5BP1Q8WTZ4 195 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 RAB39BQ96DA2 213 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 MRPL20Q9BYC9 149 aaKnown RBP16.41■□□□□ 0.22
USP39-204ENST00000409766 H3BQ15 152 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 EIF3GO75821 320 aaKnown RBP eCLIP16.41■□□□□ 0.22
USP39-204ENST00000409766 CEBPGP53567 150 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 LINC00311Q8N616 119 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 LHX4Q969G2 390 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 TUBA4BQ9H853 241 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 PRNDQ9UKY0 176 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 OR51B2Q9Y5P1 312 aa16.41■□□□□ 0.22
USP39-204ENST00000409766 CTXND1A0A1B0GTU2 59 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 J3QR06 171 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 UPK2O00526 184 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 C15orf54Q8N8G6 183 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 OR5AN1Q8NGI8 311 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 TMEM204Q9BSN7 226 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 PRORYQ9H606 182 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 ZNF257Q9Y2Q1 563 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 LRBAP50851 2863 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 A0A087X0M5 115 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 A0A1B0GX30 115 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 MPDU1O75352 247 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 MYOD1P15172 320 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 COL8A2P25067 703 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 RAB11AP62491 216 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 TREML4Q6UXN2 200 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 OSR1Q8TAX0 266 aaPredicted RBP16.4■□□□□ 0.22
USP39-204ENST00000409766 SLC25A22Q9H936 323 aa16.4■□□□□ 0.22
USP39-204ENST00000409766 TNCP24821 2201 aa16.39■□□□□ 0.22
USP39-204ENST00000409766 LYNX1G3V0Z9 82 aa16.39■□□□□ 0.21
USP39-204ENST00000409766 H0YJW9 148 aa16.39■□□□□ 0.21
USP39-204ENST00000409766 LYNX1P0DP58 116 aa16.39■□□□□ 0.21
USP39-204ENST00000409766 DLK1P80370 383 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms