RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 RND3P61587 244 aa15.57■□□□□ 0.08
SNCA-203ENST00000394986 RPL23AP62750 156 aaKnown RBP15.57■□□□□ 0.08
SNCA-203ENST00000394986 CXorf66Q5JRM2 361 aaPredicted RBP15.57■□□□□ 0.08
SNCA-203ENST00000394986 COMMD1Q8N668 190 aa15.57■□□□□ 0.08
SNCA-203ENST00000394986 VSTM2AQ8TAG5 236 aa15.57■□□□□ 0.08
SNCA-203ENST00000394986 TMEM167AQ8TBQ9 72 aa15.57■□□□□ 0.08
SNCA-203ENST00000394986 R3HDM4Q96D70 268 aa15.57■□□□□ 0.08
SNCA-203ENST00000394986 ZNF486Q96H40 463 aaPredicted RBP15.57■□□□□ 0.08
SNCA-203ENST00000394986 PRRT1Q99946 306 aa15.57■□□□□ 0.08
SNCA-203ENST00000394986 KLK15Q9H2R5 256 aa15.57■□□□□ 0.08
SNCA-203ENST00000394986 COMMD9Q9P000 198 aa15.57■□□□□ 0.08
SNCA-203ENST00000394986 PKD1L1Q8TDX9 2849 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 TRAV3A0A0B4J244 114 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 CTSDP07339 412 aaPredicted RBP15.56■□□□□ 0.08
SNCA-203ENST00000394986 ELANEP08246 267 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 MYOD1P15172 320 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 PSMB8P28062 276 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 ASPHD1Q5U4P2 390 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 ZNF57Q68EA5 555 aaPredicted RBP15.56■□□□□ 0.08
SNCA-203ENST00000394986 TREML4Q6UXN2 200 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 MMD2Q8IY49 270 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 DMBX1Q8NFW5 382 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 ZFAND1Q8TCF1 268 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 SRSF12Q8WXF0 261 aaKnown RBP15.56■□□□□ 0.08
SNCA-203ENST00000394986 TMEM140Q9NV12 185 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 SLC2A8Q9NY64 477 aa15.56■□□□□ 0.08
SNCA-203ENST00000394986 FOXA2Q9Y261 457 aaPredicted RBP15.56■□□□□ 0.08
SNCA-203ENST00000394986 IGLV1-40P01703 118 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 PF4V1P10720 104 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 G6PCP35575 357 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 AP3S2P59780 193 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 POU2AF1Q16633 256 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 AKIRIN2Q53H80 203 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 GDPD1Q8N9F7 314 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 TP53RKQ96S44 253 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 PHB2Q99623 299 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 RTBDNQ9BSG5 229 aaPredicted RBP15.55■□□□□ 0.08
SNCA-203ENST00000394986 C5orf66Q9H5L9 145 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 COPZ2Q9P299 210 aa15.55■□□□□ 0.08
SNCA-203ENST00000394986 MSGN1A6NI15 193 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 MARCH11A6NNE9 402 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 CREBL2O60519 120 aaPredicted RBP15.54■□□□□ 0.08
SNCA-203ENST00000394986 ACTL6BO94805 426 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 KRASP01116 189 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 IGKV1-39P01597 117 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 IGKV1D-39P04432 117 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 FAUP35544 74 aaKnown RBP15.54■□□□□ 0.08
SNCA-203ENST00000394986 TMEM267Q0VDI3 215 aaPredicted RBP15.54■□□□□ 0.08
SNCA-203ENST00000394986 TRIQKQ629K1 86 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 TCTEX1D1Q8N7M0 179 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 RNF152Q8N8N0 203 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 AKIP1Q9NQ31 210 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 BATF3Q9NR55 127 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 BET1LQ9NYM9 111 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 SCP2D1Q9UJQ7 156 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 GPR132Q9UNW8 380 aa15.54■□□□□ 0.08
SNCA-203ENST00000394986 C14orf166Q9Y224 244 aaKnown RBP15.54■□□□□ 0.08
SNCA-203ENST00000394986 MGAM2Q2M2H8 2515 aa15.53■□□□□ 0.08
SNCA-203ENST00000394986 LINC00854A0A1B0GVQ3 168 aa15.53■□□□□ 0.08
SNCA-203ENST00000394986 NUDT19A8MXV4 375 aa15.53■□□□□ 0.08
SNCA-203ENST00000394986 ECI1P42126 302 aa15.53■□□□□ 0.08
SNCA-203ENST00000394986 ERVK-16P61578 105 aa15.53■□□□□ 0.08
SNCA-203ENST00000394986 SURF2Q15527 256 aaPredicted RBP15.53■□□□□ 0.08
SNCA-203ENST00000394986 CCDC71LQ8N9Z2 235 aa15.53■□□□□ 0.08
SNCA-203ENST00000394986 KLHL30-AS1Q8NEE0 82 aa15.53■□□□□ 0.08
SNCA-203ENST00000394986 OR5T1Q8NG75 326 aa15.53■□□□□ 0.08
SNCA-203ENST00000394986 MS4A10Q96PG2 267 aa15.53■□□□□ 0.08
SNCA-203ENST00000394986 VSIG4Q9Y279 399 aa15.53■□□□□ 0.08
SNCA-203ENST00000394986 WNK1Q9H4A3 2382 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 C3orf85A0A1B0GTC6 90 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 A0A1B0GW64 132 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 E7EUB6 86 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 H0Y980 276 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 UPK2O00526 184 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 IL6RP08887 468 aaPredicted RBP15.52■□□□□ 0.08
SNCA-203ENST00000394986 RPL8P62917 257 aaKnown RBP15.52■□□□□ 0.08
SNCA-203ENST00000394986 ZNF45Q02386 682 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 SP6Q3SY56 376 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 C8orf86Q6ZUL3 223 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 AIFM2Q9BRQ8 373 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 ZFP57Q9NU63 452 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 PTTG2Q9NZH5 202 aa15.52■□□□□ 0.08
SNCA-203ENST00000394986 HMX3A6NHT5 357 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 SERPINE2P07093 398 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 HLA-GP17693 338 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 RPL27AP46776 148 aaKnown RBP15.51■□□□□ 0.07
SNCA-203ENST00000394986 INPP1P49441 399 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 RAB9AP51151 201 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 KIAA0141Q14154 515 aaPredicted RBP15.51■□□□□ 0.07
SNCA-203ENST00000394986 TMEM65Q6PI78 240 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 ADAD2Q8NCV1 583 aaKnown RBP15.51■□□□□ 0.07
SNCA-203ENST00000394986 OR4F17Q8NGA8 305 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 OR4A5Q8NH83 315 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 MYOZ3Q8TDC0 251 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 OR4F4Q96R69 305 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 NSG2Q9Y328 171 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 TEX22C9J3V5 150 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 OR9G9P0C7N8 305 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 IL7P13232 177 aa15.51■□□□□ 0.07
SNCA-203ENST00000394986 DEFA5Q01523 94 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms