RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 A6NJ64 397 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 FCGR3BO75015 233 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 MAS1LP35410 378 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 KIR2DS2P43631 304 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 RHOGP84095 191 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 MRGPRG-AS1Q2M3A8 158 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 SFXN4Q6P4A7 337 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 ZNF66Q6ZN08 573 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 LINC00299Q6ZSB3 139 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 Q8N1Y9 231 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 TTC9CQ8N5M4 171 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 YIPF6Q96EC8 236 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 CITED4Q96RK1 184 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 TM2D3Q9BRN9 247 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 ZNF430Q9H8G1 570 aaPredicted RBP9.91□□□□□ -0.82
RPAIN-202ENST00000381208 DAPK2Q9UIK4 370 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 ANXA10Q9UJ72 324 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 ZNF257Q9Y2Q1 563 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 ETV7Q9Y603 341 aa9.91□□□□□ -0.82
RPAIN-202ENST00000381208 LOC100506127A0A0U1RQW1 187 aa9.9□□□□□ -0.82
RPAIN-202ENST00000381208 DHFRP00374 187 aa9.9□□□□□ -0.82
RPAIN-202ENST00000381208 NFYAP23511 347 aaPredicted RBP9.9□□□□□ -0.82
RPAIN-202ENST00000381208 TIMM50Q3ZCQ8 353 aa9.9□□□□□ -0.82
RPAIN-202ENST00000381208 IL34Q6ZMJ4 242 aa9.9□□□□□ -0.82
RPAIN-202ENST00000381208 IDO2Q6ZQW0 420 aa9.9□□□□□ -0.82
RPAIN-202ENST00000381208 LAX1Q8IWV1 398 aa9.9□□□□□ -0.82
RPAIN-202ENST00000381208 ZBTB34Q8NCN2 500 aa9.9□□□□□ -0.82
RPAIN-202ENST00000381208 OR2A7Q96R45 310 aa9.9□□□□□ -0.82
RPAIN-202ENST00000381208 AKIP1Q9NQ31 210 aa9.9□□□□□ -0.82
RPAIN-202ENST00000381208 RHBDL2Q9NX52 303 aa9.9□□□□□ -0.82
RPAIN-202ENST00000381208 HUWE1Q7Z6Z7 4374 aaKnown RBP9.9□□□□□ -0.83
RPAIN-202ENST00000381208 TMEM235A6NFC5 223 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 HRASP01112 189 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 CSN3P07498 182 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 APELAP0DMC3 54 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 LYL1P12980 280 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 ARPC4P59998 168 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 EXOSC2Q13868 293 aaKnown RBP9.89□□□□□ -0.83
RPAIN-202ENST00000381208 CASC10Q5T4H9 136 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 LGALS14Q8TCE9 139 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 NUDCD2Q8WVJ2 157 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 TCTEX1D2Q8WW35 142 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 SPATA25Q9BR10 227 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 TUBA4BQ9H853 241 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 PALMDQ9NP74 551 aa9.89□□□□□ -0.83
RPAIN-202ENST00000381208 ELF5Q9UKW6 265 aaPredicted RBP9.89□□□□□ -0.83
RPAIN-202ENST00000381208 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.88□□□□□ -0.83
RPAIN-202ENST00000381208 SMIM30A4D0T7 59 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 NPIPB5A8MRT5 1133 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 J3QRK9 145 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 KBTBD11O94819 623 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 TRBV12-3P01733 135 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 SDC2P34741 201 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 RPL27AP46776 148 aaKnown RBP9.88□□□□□ -0.83
RPAIN-202ENST00000381208 CTF1Q16619 201 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 HAPLN4Q86UW8 402 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 MFSD4AQ8N468 514 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 BEST4Q8NFU0 473 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 TMEM167AQ8TBQ9 72 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 NAA50Q9GZZ1 169 aaKnown RBP9.88□□□□□ -0.83
RPAIN-202ENST00000381208 DIABLOQ9NR28 239 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 RBFOX2O43251 390 aaKnown RBP eCLIP9.88□□□□□ -0.83
RPAIN-202ENST00000381208 GGCTO75223 188 aaKnown RBP9.88□□□□□ -0.83
RPAIN-202ENST00000381208 IGLV2-14P01704 120 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 IFNA6P05013 189 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 HIST1H1BP16401 226 aaKnown RBP9.88□□□□□ -0.83
RPAIN-202ENST00000381208 CBX5P45973 191 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 MECP2P51608 486 aaKnown RBP9.88□□□□□ -0.83
RPAIN-202ENST00000381208 RPL30P62888 115 aaKnown RBP9.88□□□□□ -0.83
RPAIN-202ENST00000381208 ZNF45Q02386 682 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 C15orf32Q32M92 178 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 CROCCP3Q8IVE0 287 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 PUSL1Q8N0Z8 303 aaKnown RBP9.88□□□□□ -0.83
RPAIN-202ENST00000381208 OR4A5Q8NH83 315 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 BORCS5Q969J3 196 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 SLC2A9Q9NRM0 540 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 SLC2A8Q9NY64 477 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 SPATA2Q9UM82 520 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 DNAH7Q8WXX0 4024 aa9.88□□□□□ -0.83
RPAIN-202ENST00000381208 IGKV1D-13A0A0B4J2D9 117 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 BMPR1BO00238 502 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 SSX5O60225 188 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 CRYGCP07315 174 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 IGKV1-13P0DP09 117 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 RPL8P62917 257 aaKnown RBP9.87□□□□□ -0.83
RPAIN-202ENST00000381208 CATR1Q13166 79 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 EIF4EBP1Q13541 118 aaPredicted RBP9.87□□□□□ -0.83
RPAIN-202ENST00000381208 OR2B11Q5JQS5 317 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 HOGA1Q86XE5 327 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 CD300LFQ8TDQ1 290 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 DYNLRB2Q8TF09 96 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 THAP7Q9BT49 309 aaPredicted RBP9.87□□□□□ -0.83
RPAIN-202ENST00000381208 BET1LQ9NYM9 111 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 TAS2R8Q9NYW2 309 aa9.87□□□□□ -0.83
RPAIN-202ENST00000381208 TECRQ9NZ01 308 aaKnown RBP9.87□□□□□ -0.83
RPAIN-202ENST00000381208 RYR3Q15413 4870 aa9.86□□□□□ -0.83
RPAIN-202ENST00000381208 TRAV18A0A075B6X5 111 aa9.86□□□□□ -0.83
RPAIN-202ENST00000381208 TEX22C9J3V5 150 aa9.86□□□□□ -0.83
RPAIN-202ENST00000381208 LGALS9O00182 355 aa9.86□□□□□ -0.83
RPAIN-202ENST00000381208 RBMXL2O75526 392 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms