RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Utp23Q9CX11 249 aaKnown RBP9.98□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Wbp2nlQ9D529 359 aa9.98□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Tsc22d4Q9EQN3 387 aa9.98□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Plekha2Q9ERS5 425 aa9.98□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Cldn14Q9Z0S3 239 aa9.98□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Gm9573F7C950 1606 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 NacaP70670 2187 aaKnown RBP9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Igkv12-89A0A0G2JGW8 112 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Rpl23a-ps3A0A140T8M7 156 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 4930435E12RikA6X8Z9 381 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Vmn1r204I7HIK1 302 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Gm21863J3KMP8 111 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Saa1P05366 122 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Hoxd11P23813 323 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Rab5cP35278 216 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 TspoP50637 169 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Rpl23aP62751 156 aaKnown RBP9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Lrrc52Q5M8M9 314 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 DhhQ61488 396 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Ifna15Q61718 190 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 RflnaQ7TS73 204 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 9430097D07RikQ8BS47 195 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Galnt14Q8BVG5 550 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Ssxb2Q8C5Z3 165 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Mr1Q8HWB0 341 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Poc1aQ8JZX3 405 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Olfr113Q8VEU4 312 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Dok5Q91ZM9 306 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Tmem100Q9CQG9 134 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Sval1Q9D2X6 151 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 9130008F23RikQ9D2Z6 181 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Rpl7l1Q9D8M4 246 aaKnown RBP9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Golt1aQ9DCQ3 133 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Syt7Q9R0N7 403 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Trbv5A0A0B4J1G9 113 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Olfr913E9Q716 312 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Chek1O35280 476 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Pdcd6P12815 191 aaKnown RBP9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Gabrg3P27681 467 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 CamlgP49070 294 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 LumP51885 338 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Dlx4P70436 240 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 UcnP81615 122 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Clpsl2Q3UW21 102 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Taar8bQ5QD06 344 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Ceacam10Q61400 265 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Coro2aQ8C0P5 524 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Foxn4Q8K3Q3 521 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 RhovQ8VDU1 236 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Olfr435Q8VFS3 313 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Stard4Q99JV5 224 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Ndufb8Q9D6J5 186 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 HrgQ9ESB3 525 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Myoz1Q9JK37 296 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Cacna1iE9Q7P2 2199 aa9.97□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Gm5890A0A140LI04 305 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 2010315B03RikJ3QK55 433 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Ninj1O70131 152 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Cd46O88174 365 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Fkbp2P45878 140 aaKnown RBP9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Lefty1Q64280 368 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Zfp975Q6NVD6 525 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Ceacam9Q78T27 234 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Alkal2Q80UG6 151 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Wdyhv1Q80WB5 209 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Cdk3Q80YP0 303 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Nmnat2Q8BNJ3 307 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Zfp958Q99LG7 467 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Tstd3Q9D0B5 157 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 MioxQ9QXN5 285 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 DeddQ9Z1L3 318 aa9.96□□□□□ -0.81
Col9a1-202ENSMUST00000088349 Olfr785A0A0N4SVC3 312 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm45783A0A1B0GT48 74 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Vmn1r180B9EK86 305 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr555E9Q547 315 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm43191F6YIH5 235 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Lef1P27782 397 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Fgf8P37237 268 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 RorcP51450 516 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Rab11aP62492 216 aaKnown RBP9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Cln6Q3U466 308 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Snrnp70Q62376 448 aaKnown RBP9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 PnlipQ6P8U6 465 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Rab35Q6PHN9 201 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Crispld2Q8BZQ2 495 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Q8VCE4 163 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr1420Q8VF55 309 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr994Q8VF73 314 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Thyn1Q91YJ3 226 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Hdhd3Q9CYW4 251 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Borcs8Q9D6Y4 120 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 S1pr3Q9Z0U9 378 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Rps2-ps6A0A140T8L5 221 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Olfr1124A2AT86 318 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Samt1A2BED8 237 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Gm15140A2BEE3 237 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 Eid2bE9Q2Y0 151 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 GzmbP04187 247 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 H2-DMaP28078 261 aa9.96□□□□□ -0.82
Col9a1-202ENSMUST00000088349 PiglQ5SX19 252 aa9.96□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms