RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Gm20219A0A1B0GRQ3 87 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm13083A2AGW5 501 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm15440D3Z3P4 90 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr555E9Q547 315 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Pfdn2O70591 154 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Cxcl10P17515 98 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Rab5cP35278 216 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Clec3bP43025 202 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Otx2P80206 289 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Smad4P97471 551 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 PiglQ5SX19 252 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Lefty1Q64280 368 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Cpne4Q8BLR2 557 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr1239Q8VGM8 305 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Tmem88Q9D0N8 159 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Tmem54Q9D7S1 219 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Mmp1aQ9EPL5 464 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Ndufaf3Q9JKL4 185 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 MioxQ9QXN5 285 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Fbxl17Q9QZN1 701 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Suclg1Q9WUM5 346 aaKnown RBP8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm29049A0A087WSM5 227 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm45783A0A1B0GT48 74 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm16519F8VQK7 162 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 2010315B03RikJ3QK55 433 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm21118J3QPK8 227 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Chek1O35280 476 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 P01798 113 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 FusP56959 518 aaKnown RBP8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Rac3P60764 192 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Bcl2l15Q08ED0 167 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm20909Q5FWB5 227 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm20852Q5M8R5 227 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Vdac2Q60930 295 aaKnown RBP8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Npy4rQ61041 375 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm20917Q62457 227 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm20809Q62458 227 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm20865Q62460 227 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 RflnaQ7TS73 204 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm20738Q810R8 227 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr1443Q8VFW8 312 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr494Q8VG07 314 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr802Q8VGJ2 312 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Rnf126Q91YL2 313 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Klf7Q99JB0 301 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Ms4a6dQ99N07 247 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm20806Q9D9T3 227 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Cdk20Q9JHU3 346 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm20918J3QN17 227 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Fpr2O88536 351 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Tcl1b1P56840 116 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm5127Q3UQH6 212 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Dll1Q61483 722 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Q80W69 301 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 BC049730Q810N3 246 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm10600Q8BQ57 223 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Ssxb2Q8C5Z3 165 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gpr153Q8K0Z9 631 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr1298Q8VGE6 312 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Rfpl4aQ8VH31 287 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Zfp958Q99LG7 467 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Samt4Q9D4X6 233 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 HcstQ9QUJ0 79 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Eif2s3xQ9Z0N1 472 aaKnown RBP8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Atoh7Q9Z2E5 149 aa8.42□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm884A2A9H6 3643 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Igkv6-14A0A140T8P1 115 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr102B2RT33 308 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm4950D3YUM8 205 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr250E9PV37 331 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm43191F6YIH5 235 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr417F8VQB1 309 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Mtatp6P00848 226 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Ercc1P07903 298 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 B4galt1P15535 399 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Mcpt8P43430 247 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Cln6Q3U466 308 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Slc25a26Q5U680 274 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Oas1bQ60856 376 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Defa-rs10Q64263 91 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Fbll1Q80WS3 314 aaKnown RBP8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Rbpms2Q8VC52 206 aaKnown RBP8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr101Q920Z0 308 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Rnf151Q9CQ29 239 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Hdhd3Q9CYW4 251 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm9817Q9D2M0 144 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr878Q9EQA9 314 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 NagkQ9QZ08 343 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr159Q9QZ19 319 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Col4a4Q9QZR9 1682 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Trbv5A0A0B4J1G9 113 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Gm3676D3Z236 184 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Olfr893K7N678 312 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Lef1P27782 397 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Tex52Q3TTI8 308 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Foxg1Q60987 481 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Smap2Q7TN29 428 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Q8BG31 207 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Mus81Q91ZJ0 551 aa8.41□□□□□ -1.06
Ccdc40-202ENSMUST00000053440 Prg4Q9JM99 1054 aa8.41□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms