RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 A630023A22RikJ3QP60 199 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 C3ar1O09047 477 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Epha8O09127 1004 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Ifna2P01573 190 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Mtch2Q791V5 303 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Abhd14aQ922Q6 247 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Neurl1Q923S6 574 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rnf151Q9CQ29 239 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Borcs8Q9D6Y4 120 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Zfp111Q9R164 701 aa14□□□□□ -0.17
Trim28-201ENSMUST00000005705 Samt1A2BED8 237 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gm15140A2BEE3 237 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gm42791D3YYB5 209 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Prrc1Q3UPH1 443 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Chst1Q9EQC0 411 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Nek7Q9ES74 302 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tln2Q71LX4 2375 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gm36864A0A1Y7VJE6 447 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Fndc10A2A9Q0 223 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Fgf8P37237 268 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 FusP56959 518 aaKnown RBP13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr923Q7TRB9 317 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 RetnlgQ8K426 117 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Scrt1Q99M85 348 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Mnx1Q9QZW9 404 aa13.99□□□□□ -0.17
Trim28-201ENSMUST00000005705 Nxpe5E0CX47 564 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gm7233E9PZI8 198 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gm9732F6QVC4 198 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gm16519F8VQK7 162 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gm8104K7N744 198 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 NrasP08556 189 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gsc2P56916 198 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rab11aP62492 216 aaKnown RBP13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tubg1P83887 451 aaKnown RBP13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Snrnp70Q62376 448 aaKnown RBP13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Vash1Q8C1W1 375 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Fcrl1Q8R4Y0 343 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Ddah2Q99LD8 285 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Mrpl42Q9CPV3 142 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Ascl3Q9JJR7 174 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Med12A2AGH6 2190 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 2610044O15Rik8A0A087WRJ1 410 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Ighv1-43A0A0A6YXN5 117 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gm5890A0A140LI04 305 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr893K7N678 312 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr194L7N1Y8 306 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr203L7N205 307 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Hbb-bh0P04443 147 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Nkpd1Q0VF94 599 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Grb2Q60631 217 aaKnown RBP13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Klk1b24Q61754 263 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Zfp874bQ7M6X2 447 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Vmn1r4Q8R2D3 297 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 FuomQ8R2K1 153 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Klhdc3Q8VEM9 382 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tmem50aQ9CXL1 157 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rpl23a-ps3A0A140T8M7 156 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Vmn1r180B9EK86 305 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 CrygsO35486 178 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Cd79bP15530 228 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tnfsf8P32972 239 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rpl23aP62751 156 aaKnown RBP13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Hspb6Q5EBG6 162 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr1030Q8VFL5 318 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tm4sf5Q91XF2 196 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tstd3Q9D0B5 157 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 Fbxl17Q9QZN1 701 aa13.98□□□□□ -0.17
Trim28-201ENSMUST00000005705 P10404 641 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 CryabP23927 175 aaKnown RBP13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Nkx2-1P50220 372 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tff1Q08423 87 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Foxr2Q3UM89 302 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 BC100530Q497J0 97 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 SordQ64442 357 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Lrtm1Q8BXQ3 356 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 FarsaQ8C0C7 508 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Exosc2Q8VBV3 293 aaKnown RBP13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr1054Q8VGS7 312 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tmem239Q9DA47 151 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Fzr1Q9R1K5 493 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Zfp867E9Q2M4 473 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 AvpP35455 168 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tcl1b1P56840 116 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Prr27Q3SYJ2 352 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Cln5Q3UMW8 341 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 SnrpcQ62241 159 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 2210407C18RikQ6YI28 220 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr890Q7TRD9 314 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Ppp1r14dQ7TT52 146 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Cdk3Q80YP0 303 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 TecrlQ8BFZ1 361 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Tox4Q8BU11 619 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Xkr8Q8C0T0 401 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Gkn3Q9D0T7 191 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Acp1Q9D358 158 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Rpl7l1Q9D8M4 246 aaKnown RBP13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 HrgQ9ESB3 525 aa13.97□□□□□ -0.17
Trim28-201ENSMUST00000005705 Olfr417F8VQB1 309 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 CenptQ3TJM4 515 aa13.96□□□□□ -0.17
Trim28-201ENSMUST00000005705 Nr2c2apQ3TV70 140 aa13.96□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms