RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
SMARCE1-216ENST00000580419 C19orf73Q9NVV2 129 aa11.09□□□□□ -0.63
SMARCE1-216ENST00000580419 IGKV1D-8A0A087WSZ0 117 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 MSGN1A6NI15 193 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 ACTL6BO94805 426 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 IGLV2-14P01704 120 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 FRMD6-AS1P0C7T7 363 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 MECP2P51608 486 aaKnown RBP11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 EIF4EBP1Q13541 118 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 SFXN4Q6P4A7 337 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 ZNF66Q6ZN08 573 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 LAX1Q8IWV1 398 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 NECAP1Q8NC96 275 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 ZBTB34Q8NCN2 500 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 TM2D3Q9BRN9 247 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 ZMAT4Q9H898 229 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 ZNF355PQ9NSJ1 428 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 ANXA10Q9UJ72 324 aa11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 RBMX2Q9Y388 322 aaKnown RBP11.08□□□□□ -0.64
SMARCE1-216ENST00000580419 A0A075B6Q4 140 aa11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 RBFOX2O43251 390 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 KIR2DS2P43631 304 aa11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 ZNF773Q6PK81 442 aa11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 KCTD9Q7L273 389 aa11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 OR4S2Q8NH73 311 aa11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 RCHY1Q96PM5 261 aa11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 OR51E2Q9H255 320 aa11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 ZNF430Q9H8G1 570 aaPredicted RBP11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 RHBDL2Q9NX52 303 aa11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 PEMTQ9UBM1 199 aa11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 ZNF257Q9Y2Q1 563 aa11.07□□□□□ -0.64
SMARCE1-216ENST00000580419 A0A0B4J203 849 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 ATP6V1G2O95670 118 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 SAA1P0DJI8 122 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 SNRPBP14678 240 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 PSMB9P28065 219 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 GNG2P59768 71 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 TNXAQ16473 311 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 LCN12Q6JVE5 192 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 SGPP2Q8IWX5 399 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 PUSL1Q8N0Z8 303 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 CADM3Q8N126 398 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 Q8N402 240 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 TMEM167AQ8TBQ9 72 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 MAFIPQ8WZ33 124 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 KCTD12Q96CX2 325 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 CITED4Q96RK1 184 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 PHB2Q99623 299 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 THAP7Q9BT49 309 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 ST6GALNAC5Q9BVH7 336 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 COA4Q9NYJ1 87 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 DAPK2Q9UIK4 370 aa11.06□□□□□ -0.64
SMARCE1-216ENST00000580419 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 TMEM235A6NFC5 223 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 TRIM64CA6NLI5 447 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 NPIPB5A8MRT5 1133 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 SSX5O60225 188 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 HRASP01112 189 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 RPEL1Q2QD12 228 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 CROCCP3Q8IVE0 287 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 OR4A5Q8NH83 315 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 MUC7Q8TAX7 377 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 BORCS5Q969J3 196 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 OR2A7Q96R45 310 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 ASCL2Q99929 193 aa11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 SRSF8Q9BRL6 282 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 ELF5Q9UKW6 265 aaPredicted RBP11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 RRP15Q9Y3B9 282 aaKnown RBP11.05□□□□□ -0.64
SMARCE1-216ENST00000580419 FCGR3BO75015 233 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 KBTBD11O94819 623 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 DHFRP00374 187 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 CRYGCP07315 174 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 CSN3P07498 182 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 ZNF735P0CB33 412 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 IGHV4-30-4P0DP06 118 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 SDC2P34741 201 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 CBX5P45973 191 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 RHOGP84095 191 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 ATP5G2Q06055 141 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 POU2AF1Q16633 256 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 KCTD21Q4G0X4 260 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 HOGA1Q86XE5 327 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 LGALS14Q8TCE9 139 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 AKIP1Q9NQ31 210 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 SLC2A9Q9NRM0 540 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 CSMD3Q7Z407 3707 aa11.04□□□□□ -0.64
SMARCE1-216ENST00000580419 DYNC2H1Q8NCM8 4307 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 IGKV1D-13A0A0B4J2D9 117 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 LGALS9O00182 355 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 MPPED1O15442 326 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 IGKV1-13P0DP09 117 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 NFYAP23511 347 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 SYNJ2BPP57105 145 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 ARPC4P59998 168 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 RPL30P62888 115 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 TIMM50Q3ZCQ8 353 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 IDO2Q6ZQW0 420 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 MFSD4AQ8N468 514 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 BEST4Q8NFU0 473 aa11.03□□□□□ -0.64
SMARCE1-216ENST00000580419 CD300LFQ8TDQ1 290 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms