RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 WDR12Q9GZL7 423 aaKnown RBP14.3□□□□□ -0.12
LINC01238-205ENST00000567549 TINAGL1Q9GZM7 467 aaPredicted RBP14.3□□□□□ -0.12
LINC01238-205ENST00000567549 C6orf62Q9GZU0 229 aaPredicted RBP14.3□□□□□ -0.12
LINC01238-205ENST00000567549 SDHAF2Q9NX18 166 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 PEMTQ9UBM1 199 aa14.3□□□□□ -0.12
LINC01238-205ENST00000567549 IGKV1-6A0A0C4DH72 117 aa14.29□□□□□ -0.12
LINC01238-205ENST00000567549 A8MZ25 164 aa14.29□□□□□ -0.12
LINC01238-205ENST00000567549 CTXN2P0C2S0 81 aa14.29□□□□□ -0.12
LINC01238-205ENST00000567549 CLEC2LP0C7M8 214 aa14.29□□□□□ -0.12
LINC01238-205ENST00000567549 HIST1H1DP16402 221 aaKnown RBP14.29□□□□□ -0.12
LINC01238-205ENST00000567549 RAB3BP20337 219 aa14.29□□□□□ -0.12
LINC01238-205ENST00000567549 OR9G4Q8NGQ1 327 aa14.29□□□□□ -0.12
LINC01238-205ENST00000567549 SNAPC3Q92966 411 aa14.29□□□□□ -0.12
LINC01238-205ENST00000567549 PEF1Q9UBV8 284 aaKnown RBP14.29□□□□□ -0.12
LINC01238-205ENST00000567549 MRPS7Q9Y2R9 242 aaKnown RBP14.29□□□□□ -0.12
LINC01238-205ENST00000567549 PRELID3BQ9Y3B1 194 aa14.29□□□□□ -0.12
LINC01238-205ENST00000567549 FAM223BA6NKX1 122 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 IFITM5A6NNB3 132 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 RPEL1Q2QD12 228 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 IGSF11Q5DX21 431 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 Q6ZS49 121 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 SLC25A42Q86VD7 318 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 FAM223AQ8IWN6 122 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 SPIN2AQ99865 258 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 SPIN2BQ9BPZ2 258 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 SIGLEC8Q9NYZ4 499 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 STAB2Q8WWQ8 2551 aa14.28□□□□□ -0.12
LINC01238-205ENST00000567549 ANKRD34BA5PLL1 514 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 TUSC2O75896 110 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 OR2A4O95047 310 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 IGLV2-23P01705 113 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 OR9G9P0C7N8 305 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 GSTT2P0CG29 244 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 GSTT2BP0CG30 244 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 DTYMKP23919 212 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 UBE2KP61086 200 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 ZNF45Q02386 682 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 KLF5Q13887 457 aaPredicted RBP14.27□□□□□ -0.13
LINC01238-205ENST00000567549 CASC10Q5T4H9 136 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 ZNF343Q6P1L6 599 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 Q8N402 240 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 BVESQ8NE79 360 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 OR2K2Q8NGT1 345 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 BORCS5Q969J3 196 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 AKIP1Q9NQ31 210 aa14.27□□□□□ -0.13
LINC01238-205ENST00000567549 SHISA3A0PJX4 238 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 NOTOA8MTQ0 251 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 MFNGO00587 321 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 IFNA6P05013 189 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 CRYGBP07316 175 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 IGHV4-30-4P0DP06 118 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 GNB3P16520 340 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 TNXAQ16473 311 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 VSTM2AQ8TAG5 236 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 CITED4Q96RK1 184 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 SPATA25Q9BR10 227 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 TUBA4BQ9H853 241 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 ADAM30Q9UKF2 790 aa14.26□□□□□ -0.13
LINC01238-205ENST00000567549 CTDSP2O14595 271 aa14.25□□□□□ -0.13
LINC01238-205ENST00000567549 RGS5O15539 181 aa14.25□□□□□ -0.13
LINC01238-205ENST00000567549 CRYZL1O95825 349 aa14.25□□□□□ -0.13
LINC01238-205ENST00000567549 ETV6P41212 452 aa14.25□□□□□ -0.13
LINC01238-205ENST00000567549 SPANXN2Q5MJ10 180 aa14.25□□□□□ -0.13
LINC01238-205ENST00000567549 MMD2Q8IY49 270 aa14.25□□□□□ -0.13
LINC01238-205ENST00000567549 TM2D3Q9BRN9 247 aa14.25□□□□□ -0.13
LINC01238-205ENST00000567549 ATG5Q9H1Y0 275 aa14.25□□□□□ -0.13
LINC01238-205ENST00000567549 KCNK7Q9Y2U2 307 aa14.25□□□□□ -0.13
LINC01238-205ENST00000567549 MSGN1A6NI15 193 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 RAB27BO00194 218 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 TNFSF8P32971 234 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 DUTP33316 252 aaKnown RBP14.24□□□□□ -0.13
LINC01238-205ENST00000567549 SYNJ2BPP57105 145 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 LINC00205P59089 165 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 PJVKQ0ZLH3 352 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 CDK10Q15131 360 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 PRSS8Q16651 343 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 IDNKQ5T6J7 187 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 SFXN4Q6P4A7 337 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 H1FOOQ8IZA3 346 aaPredicted RBP14.24□□□□□ -0.13
LINC01238-205ENST00000567549 ZNF645Q8N7E2 425 aa14.24□□□□□ -0.13
LINC01238-205ENST00000567549 SRSF12Q8WXF0 261 aaKnown RBP14.24□□□□□ -0.13
LINC01238-205ENST00000567549 DHFRP00374 187 aa14.23□□□□□ -0.13
LINC01238-205ENST00000567549 PPP5CP53041 499 aa14.23□□□□□ -0.13
LINC01238-205ENST00000567549 ATP5G2Q06055 141 aa14.23□□□□□ -0.13
LINC01238-205ENST00000567549 KCTD9Q7L273 389 aa14.23□□□□□ -0.13
LINC01238-205ENST00000567549 CCDC190Q86UF4 302 aa14.23□□□□□ -0.13
LINC01238-205ENST00000567549 LAX1Q8IWV1 398 aa14.23□□□□□ -0.13
LINC01238-205ENST00000567549 MFSD4AQ8N468 514 aa14.23□□□□□ -0.13
LINC01238-205ENST00000567549 AIFM2Q9BRQ8 373 aa14.23□□□□□ -0.13
LINC01238-205ENST00000567549 C19orf73Q9NVV2 129 aa14.23□□□□□ -0.13
LINC01238-205ENST00000567549 NECAP1Q8NC96 275 aa14.22□□□□□ -0.13
LINC01238-205ENST00000567549 ADAD2Q8NCV1 583 aaKnown RBP14.22□□□□□ -0.13
LINC01238-205ENST00000567549 IL17DQ8TAD2 202 aa14.22□□□□□ -0.13
LINC01238-205ENST00000567549 DDB2Q92466 427 aa14.22□□□□□ -0.13
LINC01238-205ENST00000567549 CMTM3Q96MX0 182 aa14.22□□□□□ -0.13
LINC01238-205ENST00000567549 HSD17B10Q99714 261 aaKnown RBP14.22□□□□□ -0.13
LINC01238-205ENST00000567549 COMMD3Q9UBI1 195 aa14.22□□□□□ -0.13
LINC01238-205ENST00000567549 ZNF230Q9UIE0 474 aaPredicted RBP14.22□□□□□ -0.13
LINC01238-205ENST00000567549 DAPK2Q9UIK4 370 aa14.22□□□□□ -0.13
LINC01238-205ENST00000567549 OR2W1Q9Y3N9 320 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms