RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 CSN3P07498 182 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 NFYAP23511 347 aaPredicted RBP12.35□□□□□ -0.43
SNX1-213ENST00000561026 RHOGP84095 191 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 CDK10Q15131 360 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 TPRA1Q86W33 373 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 SGPP2Q8IWX5 399 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 NUDCD2Q8WVJ2 157 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 CITED4Q96RK1 184 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 SPIN2AQ99865 258 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 SPIN2BQ9BPZ2 258 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 DCUN1D5Q9BTE7 237 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 AKIP1Q9NQ31 210 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 DAPK2Q9UIK4 370 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 RBMX2Q9Y388 322 aaKnown RBP12.35□□□□□ -0.43
SNX1-213ENST00000561026 PRELID3BQ9Y3B1 194 aa12.35□□□□□ -0.43
SNX1-213ENST00000561026 TRBV9A0A0B4J1U6 114 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 TMEM235A6NFC5 223 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 FAM223BA6NKX1 122 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 TUSC2O75896 110 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 SCGNO76038 276 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 SLC22A5O76082 557 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 OR2A4O95047 310 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 PRH1P02810 166 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 CD36P16671 472 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 PSMB9P28065 219 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 RPL30P62888 115 aaKnown RBP12.34□□□□□ -0.43
SNX1-213ENST00000561026 ZNF45Q02386 682 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 CNIH2Q6PI25 160 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 KCTD9Q7L273 389 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 FAM223AQ8IWN6 122 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 MMD2Q8IY49 270 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 TTC9CQ8N5M4 171 aa12.34□□□□□ -0.43
SNX1-213ENST00000561026 IGKV1D-13A0A0B4J2D9 117 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 IGKV1-13P0DP09 117 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 LYL1P12980 280 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 ATP5G2Q06055 141 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 OR2B11Q5JQS5 317 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 C10orf55Q5SWW7 151 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 LCN12Q6JVE5 192 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 FCGR1BQ92637 280 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 THAP7Q9BT49 309 aaPredicted RBP12.33□□□□□ -0.44
SNX1-213ENST00000561026 ANXA10Q9UJ72 324 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 SSR3Q9UNL2 185 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 MRPS7Q9Y2R9 242 aaKnown RBP12.33□□□□□ -0.44
SNX1-213ENST00000561026 DNAH7Q8WXX0 4024 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 TENM2Q9NT68 2774 aa12.33□□□□□ -0.44
SNX1-213ENST00000561026 BMPR1BO00238 502 aa12.32□□□□□ -0.44
SNX1-213ENST00000561026 SSX5O60225 188 aa12.32□□□□□ -0.44
SNX1-213ENST00000561026 MECP2P51608 486 aaKnown RBP12.32□□□□□ -0.44
SNX1-213ENST00000561026 GNG2P59768 71 aa12.32□□□□□ -0.44
SNX1-213ENST00000561026 EIF4EBP1Q13541 118 aaPredicted RBP12.32□□□□□ -0.44
SNX1-213ENST00000561026 SFXN4Q6P4A7 337 aa12.32□□□□□ -0.44
SNX1-213ENST00000561026 VKORC1L1Q8N0U8 176 aa12.32□□□□□ -0.44
SNX1-213ENST00000561026 Q8N402 240 aa12.32□□□□□ -0.44
SNX1-213ENST00000561026 NECAP1Q8NC96 275 aa12.32□□□□□ -0.44
SNX1-213ENST00000561026 HSD17B10Q99714 261 aaKnown RBP12.32□□□□□ -0.44
SNX1-213ENST00000561026 OR51E2Q9H255 320 aa12.32□□□□□ -0.44
SNX1-213ENST00000561026 PEMTQ9UBM1 199 aa12.32□□□□□ -0.44
SNX1-213ENST00000561026 RRP15Q9Y3B9 282 aaKnown RBP12.32□□□□□ -0.44
SNX1-213ENST00000561026 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.31□□□□□ -0.44
SNX1-213ENST00000561026 AIREO43918 545 aa12.31□□□□□ -0.44
SNX1-213ENST00000561026 EXOSC2Q13868 293 aaKnown RBP12.31□□□□□ -0.44
SNX1-213ENST00000561026 GTSCR1Q86UQ5 136 aa12.31□□□□□ -0.44
SNX1-213ENST00000561026 SLC25A42Q86VD7 318 aa12.31□□□□□ -0.44
SNX1-213ENST00000561026 OR4S2Q8NH73 311 aa12.31□□□□□ -0.44
SNX1-213ENST00000561026 LGALS14Q8TCE9 139 aa12.31□□□□□ -0.44
SNX1-213ENST00000561026 YTHDF1Q9BYJ9 559 aaKnown RBP12.31□□□□□ -0.44
SNX1-213ENST00000561026 RHBDL2Q9NX52 303 aa12.31□□□□□ -0.44
SNX1-213ENST00000561026 SPATA2Q9UM82 520 aa12.31□□□□□ -0.44
SNX1-213ENST00000561026 IZUMO1RA6ND01 250 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 SDC2P34741 201 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 BRWD1-AS2P59051 145 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 C15orf32Q32M92 178 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 VSTM2AQ8TAG5 236 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 TCTEX1D2Q8WW35 142 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 OR2A7Q96R45 310 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 ZNF257Q9Y2Q1 563 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 HMX3A6NHT5 357 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 TEX22C9J3V5 150 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 OR2J3O76001 311 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 KBTBD11O94819 623 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 ATP6V1G2O95670 118 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 SCAND1P57086 179 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 HAGHQ16775 308 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 FAM209BQ5JX69 171 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 ZNF66Q6ZN08 573 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 PUSL1Q8N0Z8 303 aaKnown RBP12.3□□□□□ -0.44
SNX1-213ENST00000561026 MFSD4AQ8N468 514 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 OR2K2Q8NGT1 345 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 TMEM167AQ8TBQ9 72 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
SNX1-213ENST00000561026 SPATA25Q9BR10 227 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 Q9H521 79 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 EDA2RQ9HAV5 297 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 TAS2R8Q9NYW2 309 aa12.3□□□□□ -0.44
SNX1-213ENST00000561026 NPIPB5A8MRT5 1133 aa12.29□□□□□ -0.44
SNX1-213ENST00000561026 E7EUB6 86 aa12.29□□□□□ -0.44
SNX1-213ENST00000561026 IL6RP08887 468 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms