RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 SACSQ9NZJ4 4579 aa6.67□□□□□ -1.34
PDPN-209ENST00000510906 TENM3Q9P273 2699 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 TRGV11A0A075B6L2 103 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 A0A1W2PN81 502 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 I3L521 148 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 SLC25A17O43808 307 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 CA2P00918 260 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 APOA2P02652 100 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 SDC2P34741 201 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 CHRNA7P36544 502 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 TALDO1P37837 337 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 RAB9AP51151 201 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 CRIP2P52943 208 aaPredicted RBP6.66□□□□□ -1.34
PDPN-209ENST00000510906 GNB1P62873 340 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 CDNFQ49AH0 187 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 DEFB121Q5J5C9 76 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 PDPNQ86YL7 162 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.66□□□□□ -1.34
PDPN-209ENST00000510906 OR10J5Q8NHC4 309 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 LGALS14Q8TCE9 139 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 TSNAXQ99598 290 aaKnown RBP6.66□□□□□ -1.34
PDPN-209ENST00000510906 GINS4Q9BRT9 223 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 ALX4Q9H161 411 aaPredicted RBP6.66□□□□□ -1.34
PDPN-209ENST00000510906 RNF167Q9H6Y7 350 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 SLC35D1Q9NTN3 355 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 DAPK2Q9UIK4 370 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 SSR3Q9UNL2 185 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 FOXA2Q9Y261 457 aaPredicted RBP6.66□□□□□ -1.34
PDPN-209ENST00000510906 NUBP2Q9Y5Y2 271 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 DNAH9Q9NYC9 4486 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 UBR4Q5T4S7 5183 aa6.66□□□□□ -1.34
PDPN-209ENST00000510906 LOC100506127A0A0U1RQW1 187 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 SEC14L6B5MCN3 397 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 ARPC1BO15143 372 aaKnown RBP6.65□□□□□ -1.34
PDPN-209ENST00000510906 ACTL6BO94805 426 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 SPDEFO95238 335 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 DIRAS3O95661 229 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 IGLV2-23P01705 113 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 DTYMKP23919 212 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 SSBP2P81877 361 aaPredicted RBP6.65□□□□□ -1.34
PDPN-209ENST00000510906 DGCR2P98153 550 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 RUNX1Q01196 453 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 MXD1Q05195 221 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 PJVKQ0ZLH3 352 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 NEDD8Q15843 81 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 SRSF7Q16629 238 aaKnown RBP eCLIP6.65□□□□□ -1.34
PDPN-209ENST00000510906 ACTBL2Q562R1 376 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 SFXN4Q6P4A7 337 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 UNQ5815/PRO19632Q6UWF5 114 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 ZNF562Q6V9R5 426 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 Q6ZS49 121 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 TPRA1Q86W33 373 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 PPP1R27Q86WC6 154 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 H1FOOQ8IZA3 346 aaPredicted RBP6.65□□□□□ -1.34
PDPN-209ENST00000510906 LFNGQ8NES3 379 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 OR1N2Q8NGR9 330 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 GRPEL2Q8TAA5 225 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 NUDCD2Q8WVJ2 157 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 FLYWCH2Q96CP2 140 aaKnown RBP6.65□□□□□ -1.34
PDPN-209ENST00000510906 C20orf173Q96LM9 149 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 ST6GALNAC5Q9BVH7 336 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.65□□□□□ -1.34
PDPN-209ENST00000510906 BATF3Q9NR55 127 aa6.65□□□□□ -1.34
PDPN-209ENST00000510906 RBM7Q9Y580 266 aaKnown RBP6.65□□□□□ -1.34
PDPN-209ENST00000510906 TMEM235A6NFC5 223 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 J3QRK9 145 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 SSX5O60225 188 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 IGHV3-11P01762 117 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 CRYGBP07316 175 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 CD36P16671 472 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 TIRAPP58753 221 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 ZNF616Q08AN1 781 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 TMEM267Q0VDI3 215 aaPredicted RBP6.64□□□□□ -1.35
PDPN-209ENST00000510906 FXYD3Q14802 87 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 ARL6IP1Q15041 203 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 ZNF260Q3ZCT1 412 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 KCTD21Q4G0X4 260 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 AKIRIN2Q53H80 203 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 C9orf66Q5T8R8 295 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 HACD4Q5VWC8 232 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 TCTEX1D1Q8N7M0 179 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 OR5H6Q8NGV6 325 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 ARPC1AQ92747 370 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 HARBI1Q96MB7 349 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 MS4A10Q96PG2 267 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 PRR25Q96S07 402 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 CENPOQ9BU64 300 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 RHBDL2Q9NX52 303 aa6.64□□□□□ -1.35
PDPN-209ENST00000510906 IGHV4OR15-8A0A075B7B6 117 aa6.63□□□□□ -1.35
PDPN-209ENST00000510906 A0A087WW49 117 aa6.63□□□□□ -1.35
PDPN-209ENST00000510906 SRRM4A7MD48 611 aaKnown RBP6.63□□□□□ -1.35
PDPN-209ENST00000510906 LINC00473A8K010 186 aa6.63□□□□□ -1.35
PDPN-209ENST00000510906 LGALS1P09382 135 aaKnown RBP6.63□□□□□ -1.35
PDPN-209ENST00000510906 OR8U8P0C7N1 319 aa6.63□□□□□ -1.35
PDPN-209ENST00000510906 NFYAP23511 347 aaPredicted RBP6.63□□□□□ -1.35
PDPN-209ENST00000510906 DUTP33316 252 aaKnown RBP6.63□□□□□ -1.35
PDPN-209ENST00000510906 LGALS7P47929 136 aa6.63□□□□□ -1.35
PDPN-209ENST00000510906 TPPP2P59282 170 aa6.63□□□□□ -1.35
PDPN-209ENST00000510906 GNG2P59768 71 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms