RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ARL6IP5O75915 188 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 APOA2P02652 100 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 FOLR2P14207 255 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 MAPK3P27361 379 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-211ENST00000508546 CALRP27797 417 aaKnown RBP7.02□□□□□ -1.29
NEDD9-211ENST00000508546 SDC2P34741 201 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 BMI1P35226 326 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 RPS19P39019 145 aaKnown RBP7.02□□□□□ -1.29
NEDD9-211ENST00000508546 RORCP51449 518 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 LINC00205P59089 165 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 RPS11P62280 158 aaKnown RBP eCLIP7.02□□□□□ -1.29
NEDD9-211ENST00000508546 ACSM3Q53FZ2 586 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 FAM209BQ5JX69 171 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 Q6ZWC4 215 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 MOB1BQ7L9L4 216 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 CEACAM19Q7Z692 300 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 LYG2Q86SG7 212 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 FAM223AQ8IWN6 122 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 ZNF383Q8NA42 475 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 ADAD2Q8NCV1 583 aaKnown RBP7.02□□□□□ -1.29
NEDD9-211ENST00000508546 THRSPQ92748 146 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 FAM46BQ96A09 425 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 PTX4Q96A99 478 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 WDR89Q96FK6 387 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-211ENST00000508546 NEDD4LQ96PU5 975 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 C6orf62Q9GZU0 229 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-211ENST00000508546 NXF2Q9GZY0 626 aaKnown RBP7.02□□□□□ -1.29
NEDD9-211ENST00000508546 C11orf54Q9H0W9 315 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-211ENST00000508546 GHRLQ9UBU3 117 aa7.02□□□□□ -1.29
NEDD9-211ENST00000508546 ZNF230Q9UIE0 474 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-211ENST00000508546 TRBV5-7A0A0A0MS05 114 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 TRBV6-6A0A0A6YYG2 114 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 TRBV9A0A0B4J1U6 114 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 SMIM30A4D0T7 59 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 MSGN1A6NI15 193 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 LGALS9O00182 355 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 UCHL1P09936 223 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 CLEC2LP0C7M8 214 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 OR9G9P0C7N8 305 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 ZBTB25P24278 435 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 S100A5P33763 92 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 CEACAM6P40199 344 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 RHOGP84095 191 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 EXOSC2Q13868 293 aaKnown RBP7.01□□□□□ -1.29
NEDD9-211ENST00000508546 HSD17B12Q53GQ0 312 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 C6orf201Q7Z4U5 140 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 TPRA1Q86W33 373 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-211ENST00000508546 KCNG3Q8TAE7 436 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 PHYHIPQ92561 330 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 AP3S1Q92572 193 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 DERL3Q96Q80 235 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 UQCC2Q9BRT2 126 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 FAAP24Q9BTP7 215 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 AKIP1Q9NQ31 210 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 SLC35D1Q9NTN3 355 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 ZNF221Q9UK13 617 aa7.01□□□□□ -1.29
NEDD9-211ENST00000508546 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
NEDD9-211ENST00000508546 A0A075B6Q4 140 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 TRAV1-2A0A0B4J238 106 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 A0A1B0GVY2 172 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 SPRY2O43597 315 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 TUSC2O75896 110 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 ATP5G2Q06055 141 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 MRGPRG-AS1Q2M3A8 158 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 ANKRD55Q3KP44 614 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 CROCCP3Q8IVE0 287 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 TMEM61Q8N0U2 210 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 TMEM217Q8N7C4 229 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 NKAIN3Q8N8D7 197 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 OR52B4Q8NGK2 314 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 S100ZQ8WXG8 99 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 HARBI1Q96MB7 349 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 PHB2Q99623 299 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 WDR12Q9GZL7 423 aaKnown RBP7□□□□□ -1.29
NEDD9-211ENST00000508546 RIMS4Q9H426 269 aaPredicted RBP7□□□□□ -1.29
NEDD9-211ENST00000508546 OR1A1Q9P1Q5 309 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 MGAT4AQ9UM21 535 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 DMRT1Q9Y5R6 373 aa7□□□□□ -1.29
NEDD9-211ENST00000508546 A0A1W2PPK0 400 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 UBE2CO00762 179 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 GGCTO75223 188 aaKnown RBP6.99□□□□□ -1.29
NEDD9-211ENST00000508546 UBBP0CG47 229 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 APELAP0DMC3 54 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 RAB3BP20337 219 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 EDN2P20800 178 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 CBLN1P23435 193 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 HLA-DRB3P79483 266 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 TAGLNQ01995 201 aaKnown RBP6.99□□□□□ -1.29
NEDD9-211ENST00000508546 ZNF45Q02386 682 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 ZNF846Q147U1 533 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 TMEM177Q53S58 311 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 ZNF57Q68EA5 555 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-211ENST00000508546 SFXN4Q6P4A7 337 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 NR2C2APQ86WQ0 139 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 GPHB5Q86YW7 130 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 NECAP1Q8NC96 275 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 PHLDA1Q8WV24 401 aaPredicted RBP6.99□□□□□ -1.29
NEDD9-211ENST00000508546 TM2D1Q9BX74 207 aa6.99□□□□□ -1.29
NEDD9-211ENST00000508546 CHMP1AQ9HD42 196 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms