RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 GTSCR1Q86UQ5 136 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 SPARTQ8N0X7 666 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 Q8N1Y9 231 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 Q8N402 240 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 NECAP1Q8NC96 275 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 ADAD2Q8NCV1 583 aaKnown RBP9.53□□□□□ -0.88
COL6A1-205ENST00000492851 OR2K2Q8NGT1 345 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 OR51E2Q9H255 320 aa9.53□□□□□ -0.88
COL6A1-205ENST00000492851 TXNL4BQ9NX01 149 aaKnown RBP9.53□□□□□ -0.88
COL6A1-205ENST00000492851 RBMX2Q9Y388 322 aaKnown RBP9.53□□□□□ -0.88
COL6A1-205ENST00000492851 FCGR3BO75015 233 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 IGHV4-30-4P0DP06 118 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
COL6A1-205ENST00000492851 PSMB9P28065 219 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 MAS1LP35410 378 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 DYRK1AQ13627 763 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 TTC9CQ8N5M4 171 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 OR4S2Q8NH73 311 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 KCTD12Q96CX2 325 aaKnown RBP9.52□□□□□ -0.89
COL6A1-205ENST00000492851 TM2D3Q9BRN9 247 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 ZNF430Q9H8G1 570 aaPredicted RBP9.52□□□□□ -0.89
COL6A1-205ENST00000492851 C19orf73Q9NVV2 129 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 DAPK2Q9UIK4 370 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 ANXA10Q9UJ72 324 aa9.52□□□□□ -0.89
COL6A1-205ENST00000492851 IGKV1D-8A0A087WSZ0 117 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 A0A0A6YYH2 397 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 TRBV9A0A0B4J1U6 114 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 A6NJ64 397 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 DHFRP00374 187 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 HRASP01112 189 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 LYL1P12980 280 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 NFYAP23511 347 aaPredicted RBP9.51□□□□□ -0.89
COL6A1-205ENST00000492851 RHOGP84095 191 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 MSMO1Q15800 293 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 MRGPRG-AS1Q2M3A8 158 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 CASC10Q5T4H9 136 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 SFXN4Q6P4A7 337 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 IL34Q6ZMJ4 242 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 ZNF66Q6ZN08 573 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 IDO2Q6ZQW0 420 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 NR2C2APQ86WQ0 139 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 C5orf30Q96GV9 206 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 OR2A7Q96R45 310 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 CITED4Q96RK1 184 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 PALMDQ9NP74 551 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 ZNF257Q9Y2Q1 563 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 RRP15Q9Y3B9 282 aaKnown RBP9.51□□□□□ -0.89
COL6A1-205ENST00000492851 ETV7Q9Y603 341 aa9.51□□□□□ -0.89
COL6A1-205ENST00000492851 KMT2CQ8NEZ4 4911 aaKnown RBP9.5□□□□□ -0.89
COL6A1-205ENST00000492851 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.5□□□□□ -0.89
COL6A1-205ENST00000492851 DPPA5A6NC42 116 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 J3QRK9 145 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 IFNA6P05013 189 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 CSN3P07498 182 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 SAA1P0DJI8 122 aaPredicted RBP9.5□□□□□ -0.89
COL6A1-205ENST00000492851 APELAP0DMC3 54 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 KIR2DS2P43631 304 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 ARPC4P59998 168 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 LAX1Q8IWV1 398 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 MFSD4AQ8N468 514 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 ZBTB34Q8NCN2 500 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 SPATA25Q9BR10 227 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 TUBA4BQ9H853 241 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 AKIP1Q9NQ31 210 aa9.5□□□□□ -0.89
COL6A1-205ENST00000492851 TMEM235A6NFC5 223 aa9.49□□□□□ -0.89
COL6A1-205ENST00000492851 OR4A5Q8NH83 315 aa9.49□□□□□ -0.89
COL6A1-205ENST00000492851 TMEM167AQ8TBQ9 72 aa9.49□□□□□ -0.89
COL6A1-205ENST00000492851 TCTEX1D2Q8WW35 142 aa9.49□□□□□ -0.89
COL6A1-205ENST00000492851 BORCS5Q969J3 196 aa9.49□□□□□ -0.89
COL6A1-205ENST00000492851 DIABLOQ9NR28 239 aa9.49□□□□□ -0.89
COL6A1-205ENST00000492851 RHBDL2Q9NX52 303 aa9.49□□□□□ -0.89
COL6A1-205ENST00000492851 ELF5Q9UKW6 265 aaPredicted RBP9.49□□□□□ -0.89
COL6A1-205ENST00000492851 SPATA2Q9UM82 520 aa9.49□□□□□ -0.89
COL6A1-205ENST00000492851 NPIPB5A8MRT5 1133 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 GGCTO75223 188 aaKnown RBP9.48□□□□□ -0.89
COL6A1-205ENST00000492851 KBTBD11O94819 623 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 ATP6V1G2O95670 118 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 IGLV2-14P01704 120 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 HIST1H1BP16401 226 aaKnown RBP9.48□□□□□ -0.89
COL6A1-205ENST00000492851 SDC2P34741 201 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 CBX5P45973 191 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 RPL27AP46776 148 aaKnown RBP9.48□□□□□ -0.89
COL6A1-205ENST00000492851 MECP2P51608 486 aaKnown RBP9.48□□□□□ -0.89
COL6A1-205ENST00000492851 RPL30P62888 115 aaKnown RBP9.48□□□□□ -0.89
COL6A1-205ENST00000492851 EXOSC2Q13868 293 aaKnown RBP9.48□□□□□ -0.89
COL6A1-205ENST00000492851 C15orf32Q32M92 178 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 HAPLN4Q86UW8 402 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 CROCCP3Q8IVE0 287 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 BEST4Q8NFU0 473 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 LGALS14Q8TCE9 139 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 NUDCD2Q8WVJ2 157 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 ISOC1Q96CN7 298 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 SLC2A9Q9NRM0 540 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 SLC2A8Q9NY64 477 aa9.48□□□□□ -0.89
COL6A1-205ENST00000492851 TECRQ9NZ01 308 aaKnown RBP9.48□□□□□ -0.89
COL6A1-205ENST00000492851 SORL1Q92673 2214 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 TRAV18A0A075B6X5 111 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 SMIM30A4D0T7 59 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 LGALS9O00182 355 aa9.47□□□□□ -0.89
COL6A1-205ENST00000492851 BMPR1BO00238 502 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms