RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 MPPED1O15442 326 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 DIRAS3O95661 229 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 CRYZL1O95825 349 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TRBV12-3P01733 135 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TALDO1P37837 337 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 MXD1Q05195 221 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TNXAQ16473 311 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TPRA1Q86W33 373 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 IL17DQ8TAD2 202 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 ACOT12Q8WYK0 555 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 ADTRPQ96IZ2 230 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 PEF1Q9UBV8 284 aaKnown RBP11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 ADAM30Q9UKF2 790 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 FRAS1Q86XX4 4008 aa11.66□□□□□ -0.54
HLA-DQB1-208ENST00000484729 HERC2O95714 4834 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 MSGN1A6NI15 193 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 IFITM5A6NNB3 132 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 H0Y980 276 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RAB27BO00194 218 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 OR9G9P0C7N8 305 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RAB6AP20340 208 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 SDC2P34741 201 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 ALDH3B2P48448 385 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 UBE2KP61086 200 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 DYRK1AQ13627 763 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TATDN3Q17R31 274 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 RPEL1Q2QD12 228 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 ZNF343Q6P1L6 599 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 IDO2Q6ZQW0 420 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 USMG5Q96IX5 58 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 TUBA4BQ9H853 241 aa11.65□□□□□ -0.54
HLA-DQB1-208ENST00000484729 METTL21EPA6NDL7 271 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 NOTOA8MTQ0 251 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 J3QRK9 145 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 BRI3O95415 125 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 DUTP33316 252 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 PRSS8Q16651 343 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 MRGPRG-AS1Q2M3A8 158 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 GPR107Q5VW38 600 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 LCN12Q6JVE5 192 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 IL34Q6ZMJ4 242 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 GTSCR1Q86UQ5 136 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 H1FOOQ8IZA3 346 aaPredicted RBP11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 TEX45Q8NA69 505 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 ADAD2Q8NCV1 583 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 SRSF12Q8WXF0 261 aaKnown RBP11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 DDB2Q92466 427 aa11.64□□□□□ -0.55
HLA-DQB1-208ENST00000484729 IGKV1D-8A0A087WSZ0 117 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 LINC00473A8K010 186 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 NOL3O60936 208 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 RBMXL2O75526 392 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 ACTL6BO94805 426 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 PRH1P02810 166 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 CLEC2LP0C7M8 214 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 SAA1P0DJI8 122 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 TGFBR1P36897 503 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 RPL5P46777 297 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 RHOGP84095 191 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 EXOSC2Q13868 293 aaKnown RBP11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 SFXN4Q6P4A7 337 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 NR2C2APQ86WQ0 139 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 OSR1Q8TAX0 266 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 LINC00476Q8WZB0 136 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 SNAPC3Q92966 411 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 DCUN1D5Q9BTE7 237 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 ATG5Q9H1Y0 275 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 HIPK2Q9H2X6 1198 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 DAPK2Q9UIK4 370 aa11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 ELF5Q9UKW6 265 aaPredicted RBP11.63□□□□□ -0.55
HLA-DQB1-208ENST00000484729 CREBL2O60519 120 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 FCGR3BO75015 233 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 OR2A4O95047 310 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 GABARAPO95166 117 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 LY6G6CO95867 125 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 CSN3P07498 182 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 VBP1P61758 197 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 NCS1P62166 190 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 OR2B11Q5JQS5 317 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 C10orf55Q5SWW7 151 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 Q6ZS49 121 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 CLVS1Q8IUQ0 354 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 Q8N402 240 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 NAA50Q9GZZ1 169 aaKnown RBP11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 ZNF430Q9H8G1 570 aaPredicted RBP11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 AKIP1Q9NQ31 210 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 PEMTQ9UBM1 199 aa11.62□□□□□ -0.55
HLA-DQB1-208ENST00000484729 FAM223BA6NKX1 122 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 DTYMKP23919 212 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 ATP5G2Q06055 141 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 ARL6IP1Q15041 203 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 IDNKQ5T6J7 187 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 KCTD9Q7L273 389 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 FAM223AQ8IWN6 122 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 ZNF645Q8N7E2 425 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 SPIN2AQ99865 258 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 SPIN2BQ9BPZ2 258 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 ST6GALNAC5Q9BVH7 336 aa11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 MRPS7Q9Y2R9 242 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB1-208ENST00000484729 PCLOQ9Y6V0 5065 aa11.6□□□□□ -0.55
HLA-DQB1-208ENST00000484729 IZUMO1RA6ND01 250 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms