RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 LCN12Q6JVE5 192 aa13.43□□□□□ -0.26
COL7A1-206ENST00000466591 CNIH2Q6PI25 160 aa13.43□□□□□ -0.26
COL7A1-206ENST00000466591 SLC25A42Q86VD7 318 aa13.43□□□□□ -0.26
COL7A1-206ENST00000466591 FAM223AQ8IWN6 122 aa13.43□□□□□ -0.26
COL7A1-206ENST00000466591 OR4S2Q8NH73 311 aa13.43□□□□□ -0.26
COL7A1-206ENST00000466591 VSTM2AQ8TAG5 236 aa13.43□□□□□ -0.26
COL7A1-206ENST00000466591 MUC7Q8TAX7 377 aa13.43□□□□□ -0.26
COL7A1-206ENST00000466591 LGALS14Q8TCE9 139 aa13.43□□□□□ -0.26
COL7A1-206ENST00000466591 C5orf30Q96GV9 206 aa13.43□□□□□ -0.26
COL7A1-206ENST00000466591 ELF5Q9UKW6 265 aaPredicted RBP13.43□□□□□ -0.26
COL7A1-206ENST00000466591 SPATA2Q9UM82 520 aa13.43□□□□□ -0.26
COL7A1-206ENST00000466591 IGKV1D-8A0A087WSZ0 117 aa13.42□□□□□ -0.26
COL7A1-206ENST00000466591 LOC100506127A0A0U1RQW1 187 aa13.42□□□□□ -0.26
COL7A1-206ENST00000466591 LINC00473A8K010 186 aa13.42□□□□□ -0.26
COL7A1-206ENST00000466591 IGHV4-30-4P0DP06 118 aa13.42□□□□□ -0.26
COL7A1-206ENST00000466591 FGF9P31371 208 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-206ENST00000466591 KLF5Q13887 457 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-206ENST00000466591 ZNF343Q6P1L6 599 aa13.42□□□□□ -0.26
COL7A1-206ENST00000466591 SFXN4Q6P4A7 337 aa13.42□□□□□ -0.26
COL7A1-206ENST00000466591 SPARTQ8N0X7 666 aa13.42□□□□□ -0.26
COL7A1-206ENST00000466591 DYNLRB2Q8TF09 96 aa13.42□□□□□ -0.26
COL7A1-206ENST00000466591 HSD17B10Q99714 261 aaKnown RBP13.42□□□□□ -0.26
COL7A1-206ENST00000466591 ZNF430Q9H8G1 570 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-206ENST00000466591 RBMX2Q9Y388 322 aaKnown RBP13.42□□□□□ -0.26
COL7A1-206ENST00000466591 SORL1Q92673 2214 aa13.41□□□□□ -0.26
COL7A1-206ENST00000466591 PRH1P02810 166 aa13.41□□□□□ -0.26
COL7A1-206ENST00000466591 SSBP2P81877 361 aaPredicted RBP13.41□□□□□ -0.26
COL7A1-206ENST00000466591 IDNKQ5T6J7 187 aa13.41□□□□□ -0.26
COL7A1-206ENST00000466591 ADAD2Q8NCV1 583 aaKnown RBP13.41□□□□□ -0.26
COL7A1-206ENST00000466591 DDB2Q92466 427 aa13.41□□□□□ -0.26
COL7A1-206ENST00000466591 FYTTD1Q96QD9 318 aaKnown RBP13.41□□□□□ -0.26
COL7A1-206ENST00000466591 RHBDL2Q9NX52 303 aa13.41□□□□□ -0.26
COL7A1-206ENST00000466591 TAS2R8Q9NYW2 309 aa13.41□□□□□ -0.26
COL7A1-206ENST00000466591 ANXA10Q9UJ72 324 aa13.41□□□□□ -0.26
COL7A1-206ENST00000466591 OR2A4O95047 310 aa13.4□□□□□ -0.26
COL7A1-206ENST00000466591 BRI3O95415 125 aa13.4□□□□□ -0.26
COL7A1-206ENST00000466591 ATP6V1G2O95670 118 aa13.4□□□□□ -0.26
COL7A1-206ENST00000466591 DHFRP00374 187 aa13.4□□□□□ -0.26
COL7A1-206ENST00000466591 LYL1P12980 280 aa13.4□□□□□ -0.26
COL7A1-206ENST00000466591 DYRK1AQ13627 763 aa13.4□□□□□ -0.26
COL7A1-206ENST00000466591 NR2C2APQ86WQ0 139 aa13.4□□□□□ -0.26
COL7A1-206ENST00000466591 Q8N402 240 aa13.4□□□□□ -0.26
COL7A1-206ENST00000466591 OR51E2Q9H255 320 aa13.4□□□□□ -0.26
COL7A1-206ENST00000466591 AKIP1Q9NQ31 210 aa13.4□□□□□ -0.26
COL7A1-206ENST00000466591 TRAV18A0A075B6X5 111 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 AIREO43918 545 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 OR2J3O76001 311 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 HRASP01112 189 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 TRBV12-3P01733 135 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 HLA-DQB1P01920 261 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 SDC2P34741 201 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 FAM209BQ5JX69 171 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 VKORC1L1Q8N0U8 176 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 NECAP1Q8NC96 275 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 SECTM1Q8WVN6 248 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 ISOC1Q96CN7 298 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 OR2A7Q96R45 310 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 AIFM2Q9BRQ8 373 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 DIABLOQ9NR28 239 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 ETV7Q9Y603 341 aa13.39□□□□□ -0.27
COL7A1-206ENST00000466591 IFNA6P05013 189 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 DEFA4P12838 97 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 KIR2DS2P43631 304 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 RPL27AP46776 148 aaKnown RBP13.38□□□□□ -0.27
COL7A1-206ENST00000466591 NEDD8Q15843 81 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 C10orf55Q5SWW7 151 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 SSX9Q7RTT3 188 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 BEST4Q8NFU0 473 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 SPATA25Q9BR10 227 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 YTHDF1Q9BYJ9 559 aaKnown RBP13.38□□□□□ -0.27
COL7A1-206ENST00000466591 HRASLSQ9HDD0 168 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 ADAM30Q9UKF2 790 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 ZNF257Q9Y2Q1 563 aa13.38□□□□□ -0.27
COL7A1-206ENST00000466591 TNFSF12O43508 249 aa13.37□□□□□ -0.27
COL7A1-206ENST00000466591 KBTBD11O94819 623 aa13.37□□□□□ -0.27
COL7A1-206ENST00000466591 FCGR2CP31995 323 aa13.37□□□□□ -0.27
COL7A1-206ENST00000466591 RPL30P62888 115 aaKnown RBP13.37□□□□□ -0.27
COL7A1-206ENST00000466591 CATR1Q13166 79 aa13.37□□□□□ -0.27
COL7A1-206ENST00000466591 C15orf32Q32M92 178 aa13.37□□□□□ -0.27
COL7A1-206ENST00000466591 ZNF773Q6PK81 442 aa13.37□□□□□ -0.27
COL7A1-206ENST00000466591 ZNF66Q6ZN08 573 aa13.37□□□□□ -0.27
COL7A1-206ENST00000466591 SLC2A8Q9NY64 477 aa13.37□□□□□ -0.27
COL7A1-206ENST00000466591 TENM3Q9P273 2699 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 IGKV1D-13A0A0B4J2D9 117 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 HMX3A6NHT5 357 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 FCER2P06734 321 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 CSN3P07498 182 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 IGKV1-13P0DP09 117 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 MAS1LP35410 378 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 SCAND1P57086 179 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 FXYD4P59646 89 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 GUCA2BQ16661 112 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 CASC10Q5T4H9 136 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 MFSD4AQ8N468 514 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 TTC9CQ8N5M4 171 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 OR13F1Q8NGS4 319 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 KCTD12Q96CX2 325 aaKnown RBP13.36□□□□□ -0.27
COL7A1-206ENST00000466591 IFT46Q9NQC8 304 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 FBXL7Q9UJT9 491 aa13.36□□□□□ -0.27
COL7A1-206ENST00000466591 TPPPO94811 219 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms