RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CLDN14O95500 239 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 IGLV1-47P01700 117 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 CRYGBP07316 175 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 APOBEC3AP31941 199 aaPredicted RBP5.35□□□□□ -1.55
USP46-202ENST00000451218 PPOXP50336 477 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 EDDM3AQ14507 147 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 VKORC1L1Q8N0U8 176 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 PUSL1Q8N0Z8 303 aaKnown RBP5.35□□□□□ -1.55
USP46-202ENST00000451218 MUC15Q8N387 334 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 ZNF471Q9BX82 626 aaPredicted RBP5.35□□□□□ -1.55
USP46-202ENST00000451218 PSG11Q9UQ72 335 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 MAP1AP78559 2803 aaPredicted RBP5.35□□□□□ -1.55
USP46-202ENST00000451218 PKDREJQ9NTG1 2253 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 TRGV8A0A0C4DH27 118 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 NUDT19A8MXV4 375 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 ST8SIA3O43173 380 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 ZG16O60844 167 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 DYNLT3P51808 116 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 ARL6IP6Q8N6S5 226 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 QTRT1Q9BXR0 403 aaKnown RBP5.35□□□□□ -1.55
USP46-202ENST00000451218 OR2S2Q9NQN1 319 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 RALYQ9UKM9 306 aaKnown RBP5.35□□□□□ -1.55
USP46-202ENST00000451218 KCNIP3Q9Y2W7 256 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 KANTRA0A1W2PQU2 76 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 MARCH11A6NNE9 402 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 RBFOX2O43251 390 aaKnown RBP eCLIP5.35□□□□□ -1.55
USP46-202ENST00000451218 TAS2R30P59541 319 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 Q3ZCU0 254 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 PXDC1Q5TGL8 231 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 TRAT1Q6PIZ9 186 aa5.35□□□□□ -1.55
USP46-202ENST00000451218 ZNF808Q8N4W9 903 aaPredicted RBP5.35□□□□□ -1.55
USP46-202ENST00000451218 MALRD1Q5VYJ5 2156 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 TNCP24821 2201 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 NAV3Q8IVL0 2385 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 FAM90A27PA6NNH2 459 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 OVOL3O00110 214 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 DNASE2O00115 360 aaPredicted RBP5.34□□□□□ -1.55
USP46-202ENST00000451218 SEC11BP0C7V7 166 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 GZMHP20718 246 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 NKX2-1P43699 371 aaPredicted RBP5.34□□□□□ -1.55
USP46-202ENST00000451218 RUNX1Q01196 453 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 HEPN1Q6WQI6 88 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 FOXRED2Q8IWF2 684 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 LINC00311Q8N616 119 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 ZNF665Q9H7R5 613 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 PARP11Q9NR21 331 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 LIN7CQ9NUP9 197 aaKnown RBP5.34□□□□□ -1.55
USP46-202ENST00000451218 DMRT1Q9Y5R6 373 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 ZNF729A6NN14 1252 aaPredicted RBP5.34□□□□□ -1.55
USP46-202ENST00000451218 FAM90A9PA6NNJ1 464 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 J3KRW8 73 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 TPT1P13693 172 aaKnown RBP5.34□□□□□ -1.55
USP46-202ENST00000451218 TMEM182Q6ZP80 229 aaPredicted RBP5.34□□□□□ -1.55
USP46-202ENST00000451218 C8orf86Q6ZUL3 223 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 IDI2-AS1Q9NZ38 188 aa5.34□□□□□ -1.55
USP46-202ENST00000451218 CR1P17927 2039 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 A6NNC1 897 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 DVL1O14640 695 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 RAB29O14966 203 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 H2AFB1P0C5Y9 115 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 ATP6V0CP27449 155 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 SNCAP37840 140 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 TMEM267Q0VDI3 215 aaPredicted RBP5.34□□□□□ -1.56
USP46-202ENST00000451218 ZNF816Q0VGE8 651 aaPredicted RBP5.34□□□□□ -1.56
USP46-202ENST00000451218 OR2B11Q5JQS5 317 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 ZNF695Q8IW36 515 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 INO80EQ8NBZ0 244 aaPredicted RBP5.34□□□□□ -1.56
USP46-202ENST00000451218 OR5AN1Q8NGI8 311 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 AP1S3Q96PC3 154 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 SMIM3Q9BZL3 60 aa5.34□□□□□ -1.56
USP46-202ENST00000451218 CARHSP1Q9Y2V2 147 aaKnown RBP5.34□□□□□ -1.56
USP46-202ENST00000451218 C22orf46C9J442 243 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 FAM90A26D6RGX4 464 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 UBE2KP61086 200 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 OR10A7Q8NGE5 316 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 TNFRSF14Q92956 283 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 SAT2Q96F10 170 aaPredicted RBP5.33□□□□□ -1.56
USP46-202ENST00000451218 SAP30LQ9HAJ7 183 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 TAS2R3Q9NYW6 316 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 ROS1P08922 2347 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 RAB19A4D1S5 217 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 B9A039 149 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 TOR1AO14656 332 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 PET100P0DJ07 73 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 CMTM1Q8IZ96 169 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.33□□□□□ -1.56
USP46-202ENST00000451218 OR5C1Q8NGR4 320 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 HSD17B10Q99714 261 aaKnown RBP5.33□□□□□ -1.56
USP46-202ENST00000451218 MMP26Q9NRE1 261 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 KLF2Q9Y5W3 355 aaPredicted RBP5.33□□□□□ -1.56
USP46-202ENST00000451218 RP1L1Q8IWN7 2480 aaPredicted RBP5.33□□□□□ -1.56
USP46-202ENST00000451218 H0YJW9 148 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 TRIM77I1YAP6 450 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 CAV2P51636 162 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 ZNF429Q86V71 674 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 PDZD9Q8IXQ8 264 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 PLEKHF2Q9H8W4 249 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 LSM4Q9Y4Z0 139 aaKnown RBP5.33□□□□□ -1.56
USP46-202ENST00000451218 DOPEY1Q5JWR5 2465 aa5.33□□□□□ -1.56
USP46-202ENST00000451218 IGHV1-69-2A0A0G2JMI3 117 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms