RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SPIN2BQ9BPZ2 258 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 ZNF430Q9H8G1 570 aaPredicted RBP16.05■□□□□ 0.16
VSX1-206ENST00000444511 DAPK2Q9UIK4 370 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 ADAM30Q9UKF2 790 aa16.05■□□□□ 0.16
VSX1-206ENST00000444511 MRPS7Q9Y2R9 242 aaKnown RBP16.05■□□□□ 0.16
VSX1-206ENST00000444511 FAM223BA6NKX1 122 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 A8MZ25 164 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 RBMXL2O75526 392 aaKnown RBP16.04■□□□□ 0.16
VSX1-206ENST00000444511 SCGNO76038 276 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 SLC22A5O76082 557 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 HLA-DQB1P01920 261 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 GNG2P59768 71 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 RHOGP84095 191 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 OR2B11Q5JQS5 317 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 TPRA1Q86W33 373 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 FAM223AQ8IWN6 122 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 MMD2Q8IY49 270 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 TM2D3Q9BRN9 247 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 AKIP1Q9NQ31 210 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 C19orf73Q9NVV2 129 aa16.04■□□□□ 0.16
VSX1-206ENST00000444511 RBMX2Q9Y388 322 aaKnown RBP16.04■□□□□ 0.16
VSX1-206ENST00000444511 TMEM235A6NFC5 223 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 OR2A4O95047 310 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 PRH1P02810 166 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 CSN3P07498 182 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 LYL1P12980 280 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 ATP5G2Q06055 141 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 EXOSC2Q13868 293 aaKnown RBP16.03■□□□□ 0.16
VSX1-206ENST00000444511 LCN12Q6JVE5 192 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 CNIH2Q6PI25 160 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 GTSCR1Q86UQ5 136 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 SPARTQ8N0X7 666 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 FCGR1BQ92637 280 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 PALMDQ9NP74 551 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 SIGLEC8Q9NYZ4 499 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 PEMTQ9UBM1 199 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 SSR3Q9UNL2 185 aa16.03■□□□□ 0.16
VSX1-206ENST00000444511 RRP15Q9Y3B9 282 aaKnown RBP16.03■□□□□ 0.16
VSX1-206ENST00000444511 RPL30P62888 115 aaKnown RBP16.02■□□□□ 0.16
VSX1-206ENST00000444511 C10orf55Q5SWW7 151 aa16.02■□□□□ 0.16
VSX1-206ENST00000444511 Q8N402 240 aa16.02■□□□□ 0.16
VSX1-206ENST00000444511 LGALS14Q8TCE9 139 aa16.02■□□□□ 0.16
VSX1-206ENST00000444511 CITED4Q96RK1 184 aa16.02■□□□□ 0.16
VSX1-206ENST00000444511 TRBV9A0A0B4J1U6 114 aa16.01■□□□□ 0.15
VSX1-206ENST00000444511 IGKV1D-13A0A0B4J2D9 117 aa16.01■□□□□ 0.15
VSX1-206ENST00000444511 IGKV1-13P0DP09 117 aa16.01■□□□□ 0.15
VSX1-206ENST00000444511 ZNF45Q02386 682 aa16.01■□□□□ 0.15
VSX1-206ENST00000444511 SFXN4Q6P4A7 337 aa16.01■□□□□ 0.15
VSX1-206ENST00000444511 SLC25A42Q86VD7 318 aa16.01■□□□□ 0.15
VSX1-206ENST00000444511 TTC9CQ8N5M4 171 aa16.01■□□□□ 0.15
VSX1-206ENST00000444511 OR4S2Q8NH73 311 aa16.01■□□□□ 0.15
VSX1-206ENST00000444511 TCTEX1D2Q8WW35 142 aa16.01■□□□□ 0.15
VSX1-206ENST00000444511 HSD17B10Q99714 261 aaKnown RBP16.01■□□□□ 0.15
VSX1-206ENST00000444511 ANXA10Q9UJ72 324 aa16.01■□□□□ 0.15
VSX1-206ENST00000444511 IGLV2-14P01704 120 aa16■□□□□ 0.15
VSX1-206ENST00000444511 VKORC1L1Q8N0U8 176 aa16■□□□□ 0.15
VSX1-206ENST00000444511 NECAP1Q8NC96 275 aa16■□□□□ 0.15
VSX1-206ENST00000444511 VSTM2AQ8TAG5 236 aa16■□□□□ 0.15
VSX1-206ENST00000444511 OR51E2Q9H255 320 aa16■□□□□ 0.15
VSX1-206ENST00000444511 Q9H521 79 aa16■□□□□ 0.15
VSX1-206ENST00000444511 TUBA4BQ9H853 241 aa16■□□□□ 0.15
VSX1-206ENST00000444511 RHBDL2Q9NX52 303 aa16■□□□□ 0.15
VSX1-206ENST00000444511 SPATA2Q9UM82 520 aa16■□□□□ 0.15
VSX1-206ENST00000444511 BMPR1BO00238 502 aa15.99■□□□□ 0.15
VSX1-206ENST00000444511 AIREO43918 545 aa15.99■□□□□ 0.15
VSX1-206ENST00000444511 SSX5O60225 188 aa15.99■□□□□ 0.15
VSX1-206ENST00000444511 OR2A7Q96R45 310 aa15.99■□□□□ 0.15
VSX1-206ENST00000444511 DPPA5A6NC42 116 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 HMX3A6NHT5 357 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 OR2J3O76001 311 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 SDC2P34741 201 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 ARPC4P59998 168 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 MXD1Q05195 221 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 OR2K2Q8NGT1 345 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 ISOC1Q96CN7 298 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 SPATA25Q9BR10 227 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 THAP7Q9BT49 309 aaPredicted RBP15.98■□□□□ 0.15
VSX1-206ENST00000444511 TAS2R8Q9NYW2 309 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 ZNF257Q9Y2Q1 563 aa15.98■□□□□ 0.15
VSX1-206ENST00000444511 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.97■□□□□ 0.15
VSX1-206ENST00000444511 IZUMO1RA6ND01 250 aa15.97■□□□□ 0.15
VSX1-206ENST00000444511 KBTBD11O94819 623 aa15.97■□□□□ 0.15
VSX1-206ENST00000444511 ATP6V1G2O95670 118 aa15.97■□□□□ 0.15
VSX1-206ENST00000444511 RPL27AP46776 148 aaKnown RBP15.97■□□□□ 0.15
VSX1-206ENST00000444511 HAGHQ16775 308 aa15.97■□□□□ 0.15
VSX1-206ENST00000444511 C15orf32Q32M92 178 aa15.97■□□□□ 0.15
VSX1-206ENST00000444511 FAM209BQ5JX69 171 aa15.97■□□□□ 0.15
VSX1-206ENST00000444511 ZNF66Q6ZN08 573 aa15.97■□□□□ 0.15
VSX1-206ENST00000444511 MFSD4AQ8N468 514 aa15.97■□□□□ 0.15
VSX1-206ENST00000444511 FYTTD1Q96QD9 318 aaKnown RBP15.97■□□□□ 0.15
VSX1-206ENST00000444511 YTHDF1Q9BYJ9 559 aaKnown RBP15.97■□□□□ 0.15
VSX1-206ENST00000444511 TEX22C9J3V5 150 aa15.96■□□□□ 0.15
VSX1-206ENST00000444511 EIF4EBP1Q13541 118 aaPredicted RBP15.96■□□□□ 0.15
VSX1-206ENST00000444511 PUSL1Q8N0Z8 303 aaKnown RBP15.96■□□□□ 0.15
VSX1-206ENST00000444511 BEST4Q8NFU0 473 aa15.96■□□□□ 0.15
VSX1-206ENST00000444511 TMEM167AQ8TBQ9 72 aa15.96■□□□□ 0.15
VSX1-206ENST00000444511 DYNLRB2Q8TF09 96 aa15.96■□□□□ 0.15
VSX1-206ENST00000444511 KCTD12Q96CX2 325 aaKnown RBP15.96■□□□□ 0.15
VSX1-206ENST00000444511 ETV7Q9Y603 341 aa15.96■□□□□ 0.15
VSX1-206ENST00000444511 TRAV18A0A075B6X5 111 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms