RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 HRASP01112 189 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 IGHV3-11P01762 117 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 GNB3P16520 340 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 GNG2P59768 71 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 NDPQ00604 133 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 ATP5G2Q06055 141 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 CDNFQ49AH0 187 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 ASPHD1Q5U4P2 390 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 C5orf24Q7Z6I8 188 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 ZNF645Q8N7E2 425 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 ZBTB34Q8NCN2 500 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 GFI1Q99684 422 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 HSD17B10Q99714 261 aaKnown RBP5.99□□□□□ -1.45
CD44-211ENST00000442151 FAM103A1Q9BTL3 118 aaKnown RBP5.99□□□□□ -1.45
CD44-211ENST00000442151 KCNK15Q9H427 330 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 TUBA4BQ9H853 241 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 FBXO7Q9Y3I1 522 aa5.99□□□□□ -1.45
CD44-211ENST00000442151 A0A075B6Q4 140 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 A0A0A6YYH2 397 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 DPPA5A6NC42 116 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 MSGN1A6NI15 193 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 A6NJ64 397 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 RAB27BO00194 218 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 SOX15O60248 233 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 IGKV1-16P04430 117 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 CRYGBP07316 175 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 HIST1H1BP16401 226 aaKnown RBP5.98□□□□□ -1.45
CD44-211ENST00000442151 FGF9P31371 208 aaPredicted RBP5.98□□□□□ -1.45
CD44-211ENST00000442151 KLF5Q13887 457 aaPredicted RBP5.98□□□□□ -1.45
CD44-211ENST00000442151 CDK10Q15131 360 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 MSMO1Q15800 293 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 PRSS8Q16651 343 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 HACD4Q5VWC8 232 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 ZNF343Q6P1L6 599 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 IZUMO2Q6UXV1 221 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 CROCCP3Q8IVE0 287 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 LAX1Q8IWV1 398 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 H1FOOQ8IZA3 346 aaPredicted RBP5.98□□□□□ -1.45
CD44-211ENST00000442151 OR9G4Q8NGQ1 327 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 ST6GALNAC5Q9BVH7 336 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 OR2W1Q9Y3N9 320 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 NBEAL2Q6ZNJ1 2754 aa5.98□□□□□ -1.45
CD44-211ENST00000442151 IGKV1-6A0A0C4DH72 117 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 PROP1O75360 226 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 OR2A4O95047 310 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 CRYZL1O95825 349 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 IGLV1-51P01701 117 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 LYL1P12980 280 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 DUTP33316 252 aaKnown RBP5.97□□□□□ -1.45
CD44-211ENST00000442151 CBX5P45973 191 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 TNXAQ16473 311 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 IGSF11Q5DX21 431 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 UBE2UQ5VVX9 321 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 ZNF66Q6ZN08 573 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 NECAP1Q8NC96 275 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 OR4S2Q8NH73 311 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 MUC7Q8TAX7 377 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 ACOT12Q8WYK0 555 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 RCHY1Q96PM5 261 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 KRTAP9-3Q9BYQ3 159 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 PARP12Q9H0J9 701 aaKnown RBP5.97□□□□□ -1.45
CD44-211ENST00000442151 ALX4Q9H161 411 aaPredicted RBP5.97□□□□□ -1.45
CD44-211ENST00000442151 OR51E2Q9H255 320 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 DIABLOQ9NR28 239 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 SLC2A8Q9NY64 477 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 ETV7Q9Y603 341 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 ANKRD34BA5PLL1 514 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 IGLV2-23P01705 113 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 HLA-DQB1P01920 261 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 FRMD6-AS1P0C7T7 363 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 PSMB9P28065 219 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 C22orf42Q6IC83 251 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 TTC9CQ8N5M4 171 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 OR4A5Q8NH83 315 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 NRG4Q8WWG1 115 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 SRSF12Q8WXF0 261 aaKnown RBP5.97□□□□□ -1.45
CD44-211ENST00000442151 SPATA25Q9BR10 227 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 TECRQ9NZ01 308 aaKnown RBP5.97□□□□□ -1.45
CD44-211ENST00000442151 THYN1Q9P016 225 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 ZNF257Q9Y2Q1 563 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 KCNK7Q9Y2U2 307 aa5.97□□□□□ -1.45
CD44-211ENST00000442151 KMT2CQ8NEZ4 4911 aaKnown RBP5.96□□□□□ -1.46
CD44-211ENST00000442151 ANKRD65E5RJM6 399 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 FCGR3BO75015 233 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 GGCTO75223 188 aaKnown RBP5.96□□□□□ -1.46
CD44-211ENST00000442151 CATR1Q13166 79 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 ANKRD55Q3KP44 614 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 TIMM50Q3ZCQ8 353 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 FAM106AQ4KMX7 169 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 KCTD9Q7L273 389 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 SBSPONQ8IVN8 264 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 LILRB2Q8N423 598 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 CD300LFQ8TDQ1 290 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 DDB2Q92466 427 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 ANAPC16Q96DE5 110 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 OR2A7Q96R45 310 aa5.96□□□□□ -1.46
CD44-211ENST00000442151 ZNF230Q9UIE0 474 aaPredicted RBP5.96□□□□□ -1.46
CD44-211ENST00000442151 RBMX2Q9Y388 322 aaKnown RBP5.96□□□□□ -1.46
CD44-211ENST00000442151 TPPPO94811 219 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms