RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 IFNA6P05013 189 aa9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 EGR2P11161 476 aaPredicted RBP9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 SLURP1P55000 103 aa9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 KCTD21Q4G0X4 260 aa9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 ZNF343Q6P1L6 599 aa9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 OR5T1Q8NG75 326 aa9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 TCTEX1D2Q8WW35 142 aa9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 S100A16Q96FQ6 103 aaKnown RBP9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 OR2A7Q96R45 310 aa9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 SRSF8Q9BRL6 282 aaKnown RBP9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 OR51E2Q9H255 320 aa9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 PALMDQ9NP74 551 aa9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 RBMX2Q9Y388 322 aaKnown RBP9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 FBXO7Q9Y3I1 522 aa9.92□□□□□ -0.82
SNORD88B-201ENST00000408454 MSGN1A6NI15 193 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 RBFOX2O43251 390 aaKnown RBP eCLIP9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 IGLV1-51P01701 117 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 SPNP16150 400 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 HERV-K104P61576 105 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 OR4A47Q6IF82 309 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 C11orf87Q6NUJ2 197 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 CMTM1Q8IZ96 169 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 BEST4Q8NFU0 473 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 IL17DQ8TAD2 202 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 DDB2Q92466 427 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 CXorf58Q96LI9 332 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 IFT46Q9NQC8 304 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 TPSG1Q9NRR2 321 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 SLC2A8Q9NY64 477 aa9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 ZNF230Q9UIE0 474 aaPredicted RBP9.91□□□□□ -0.82
SNORD88B-201ENST00000408454 A8MZ25 164 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 PROP1O75360 226 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 IGLV2-23P01705 113 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 CRYGBP07316 175 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 DEFA4P12838 97 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 RPL27AP46776 148 aaKnown RBP9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 TAS2R46P59540 309 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 ERVK-16P61578 105 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 ASPHD1Q5U4P2 390 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 LGALS14Q8TCE9 139 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 DYNLRB2Q8TF09 96 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 TUBA4BQ9H853 241 aa9.9□□□□□ -0.82
SNORD88B-201ENST00000408454 LOC100506127A0A0U1RQW1 187 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 SMIM31A0A1B0GVY4 71 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 ANKRD34BA5PLL1 514 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 TMEM235A6NFC5 223 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 NPIPB5A8MRT5 1133 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 GGCTO75223 188 aaKnown RBP9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 KBTBD11O94819 623 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 SAA1P0DJI8 122 aaPredicted RBP9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 SDC2P34741 201 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 RPL8P62917 257 aaKnown RBP9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 RHOGP84095 191 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 EXOSC2Q13868 293 aaKnown RBP9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 KLF5Q13887 457 aaPredicted RBP9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 ANKRD55Q3KP44 614 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 FAM106AQ4KMX7 169 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 IDNKQ5T6J7 187 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 LPCAT3Q6P1A2 487 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 C5orf24Q7Z6I8 188 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 TTC9CQ8N5M4 171 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 ADAD2Q8NCV1 583 aaKnown RBP9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 TSPAN14Q8NG11 270 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 OR1L6Q8NGR2 347 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 MAFIPQ8WZ33 124 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 COMMD5Q9GZQ3 224 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 TECRQ9NZ01 308 aaKnown RBP9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 SPATA2Q9UM82 520 aa9.89□□□□□ -0.83
SNORD88B-201ENST00000408454 TRAV18A0A075B6X5 111 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 TNFAIP8O95379 198 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 NQO2P16083 231 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 NFYAP23511 347 aaPredicted RBP9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 TAS2R31P59538 309 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 HOGA1Q86XE5 327 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 OR13F1Q8NGS4 319 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 TMEM167AQ8TBQ9 72 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 NUDCD2Q8WVJ2 157 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 EEF1AKMT3Q96AZ1 226 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 ISOC1Q96CN7 298 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 RCHY1Q96PM5 261 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 SPATA25Q9BR10 227 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 ALX4Q9H161 411 aaPredicted RBP9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 ZNF430Q9H8G1 570 aaPredicted RBP9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 HRASLSQ9HDD0 168 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 GAR1Q9NY12 217 aaKnown RBP9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 BET1LQ9NYM9 111 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 COMMD9Q9P000 198 aa9.88□□□□□ -0.83
SNORD88B-201ENST00000408454 A0A087WXM4 84 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 TRBV7-1A0A0A6YYK4 115 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 TPPPO94811 219 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 HPRT1P00492 218 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 FRMD6-AS1P0C7T7 363 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 SNRPBP14678 240 aaKnown RBP9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 SYNJ2BPP57105 145 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 MXD1Q05195 221 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 UBE2NLQ5JXB2 153 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 SLC16A13Q7RTY0 426 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 MFSD4AQ8N468 514 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 OR5AP2Q8NGF4 316 aa9.87□□□□□ -0.83
SNORD88B-201ENST00000408454 CASTOR1Q8WTX7 329 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms