RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SMIM8Q96KF7 97 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 SMIM3Q9BZL3 60 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 GSX2Q9BZM3 304 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 SLC25A31Q9H0C2 315 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 RBKSQ9H477 322 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 SIRT7Q9NRC8 400 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 TRAV3A0A0B4J244 114 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 NDUFS8O00217 210 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 TXNL1O43396 289 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 HRASP01112 189 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 APOA2P02652 100 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 IAPPP10997 89 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 TPT1P13693 172 aaKnown RBP12.34□□□□□ -0.43
HDHD3-201ENST00000238379 PAX1P15863 534 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 TAS2R30P59541 319 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 RPL23AP62750 156 aaKnown RBP12.34□□□□□ -0.43
HDHD3-201ENST00000238379 RELBQ01201 579 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 OR4A47Q6IF82 309 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 BAP18Q8IXM2 172 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 OR11H6Q8NGC7 330 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 MARVELD3Q96A59 401 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 PHYHIPLQ96FC7 376 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 PIMREGQ9BSJ6 248 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 PCGF1Q9BSM1 259 aa12.34□□□□□ -0.43
HDHD3-201ENST00000238379 UNKLQ9H9P5 680 aaKnown RBP12.34□□□□□ -0.43
HDHD3-201ENST00000238379 CENPEQ02224 2701 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 TENM4Q6N022 2769 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 SRRM4A7MD48 611 aaKnown RBP12.33□□□□□ -0.44
HDHD3-201ENST00000238379 H7C2Y5 167 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 ATP6V1G1O75348 118 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 RBMXL2O75526 392 aaKnown RBP12.33□□□□□ -0.44
HDHD3-201ENST00000238379 MED6O75586 246 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 GAPDHP04406 335 aaKnown RBP12.33□□□□□ -0.44
HDHD3-201ENST00000238379 IL6RP08887 468 aaPredicted RBP12.33□□□□□ -0.44
HDHD3-201ENST00000238379 OR2B8PP59922 312 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 HCP5Q6MZN7 132 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 QTRT1Q9BXR0 403 aaKnown RBP12.33□□□□□ -0.44
HDHD3-201ENST00000238379 WFDC1Q9HC57 220 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 MMP26Q9NRE1 261 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 KPTNQ9Y664 436 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 FBN2P35556 2912 aa12.33□□□□□ -0.44
HDHD3-201ENST00000238379 IGHV2-70DA0A0C4DH43 119 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 H3BP45 60 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 LY6LH3BQJ8 138 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 J3QKU1 62 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 TMEM177Q53S58 311 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 CLLU1Q5K131 121 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 CLEC2AQ6UVW9 174 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 PDPNQ86YL7 162 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 OR4A16Q8NH70 328 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 OSR1Q8TAX0 266 aaPredicted RBP12.32□□□□□ -0.44
HDHD3-201ENST00000238379 LHX4Q969G2 390 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 PERPQ96FX8 193 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 PSENENQ9NZ42 101 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 AMMECR1Q9Y4X0 333 aaPredicted RBP12.32□□□□□ -0.44
HDHD3-201ENST00000238379 JTBO76095 146 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 CST7O76096 145 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 MC5RP33032 325 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 BAXQ07812 192 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 PDLIM3Q53GG5 364 aaPredicted RBP12.32□□□□□ -0.44
HDHD3-201ENST00000238379 LDLRAD2Q5SZI1 272 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 ZNF429Q86V71 674 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 OR52E5Q8NH55 327 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 PCNPQ8WW12 178 aaKnown RBP12.32□□□□□ -0.44
HDHD3-201ENST00000238379 ZDHHC16Q969W1 377 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 FLYWCH2Q96CP2 140 aaKnown RBP12.32□□□□□ -0.44
HDHD3-201ENST00000238379 SIRPDQ9H106 197 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 WASHC3Q9Y3C0 194 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 PTPN13Q12923 2485 aa12.32□□□□□ -0.44
HDHD3-201ENST00000238379 IGHV4-61A0A0C4DH41 118 aa12.31□□□□□ -0.44
HDHD3-201ENST00000238379 C15orf61A6NNL5 157 aa12.31□□□□□ -0.44
HDHD3-201ENST00000238379 SHOXO15266 292 aa12.31□□□□□ -0.44
HDHD3-201ENST00000238379 FOXH1O75593 365 aa12.31□□□□□ -0.44
HDHD3-201ENST00000238379 EIF5AP63241 154 aaKnown RBP12.31□□□□□ -0.44
HDHD3-201ENST00000238379 KLRD1Q13241 179 aa12.31□□□□□ -0.44
HDHD3-201ENST00000238379 ZNF787Q6DD87 383 aa12.31□□□□□ -0.44
HDHD3-201ENST00000238379 UBAC2Q8NBM4 344 aa12.31□□□□□ -0.44
HDHD3-201ENST00000238379 OR4C13Q8NGP0 309 aa12.31□□□□□ -0.44
HDHD3-201ENST00000238379 DTD1Q8TEA8 209 aa12.31□□□□□ -0.44
HDHD3-201ENST00000238379 AIFM2Q9BRQ8 373 aa12.31□□□□□ -0.44
HDHD3-201ENST00000238379 POLR3KQ9Y2Y1 108 aaPredicted RBP12.31□□□□□ -0.44
HDHD3-201ENST00000238379 IGHV4-30-2A0A087WSY4 118 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 IGHV1-3A0A0C4DH29 117 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 ODF3BA8MYP8 253 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 FAM157AC9JC47 383 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 ARG1P05089 322 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 SULT1A1P50225 295 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 RAB13P51153 203 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 SPCS3P61009 180 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 RAB14P61106 215 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 FAM74A1Q5RGS3 127 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 VMO1Q7Z5L0 202 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 HARBI1Q96MB7 349 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 ARV1Q9H2C2 271 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 TMEM14BQ9NUH8 114 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 FOXA2Q9Y261 457 aaPredicted RBP12.3□□□□□ -0.44
HDHD3-201ENST00000238379 INSIG2Q9Y5U4 225 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 CELSR2Q9HCU4 2923 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 CEBPZOSA8MTT3 80 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 UPK2O00526 184 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms