RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Matn3O35701 481 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Ifna4P07351 186 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 PpicP30412 212 aaKnown RBP9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Gpr12P35412 334 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 DckP43346 260 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Rps27aP62983 156 aaKnown RBP9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Q504N7 393 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Rnf150Q5DTZ6 437 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Nr1d2Q60674 576 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Fxyd3Q61835 88 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 ScocQ78YZ6 125 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 D630044L22RikQ8C701 164 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Fate1Q8CEK7 99 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Nfam1Q8R4V1 264 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Q8VE95 218 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Olfr809Q8VEX8 328 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Scgb3a1Q920D7 104 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Tmed9Q99KF1 235 aaKnown RBP9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Atg12Q9CQY1 141 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Tex12Q9CR81 123 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Dcun1d5Q9CXV9 237 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Gp2Q9D733 531 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Myoz1Q9JK37 296 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Gnpnat1Q9JK38 184 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Asah1Q9WV54 394 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Tusc2Q9WVF8 110 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Unc119Q9Z2R6 240 aa9.8□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Olfr1234A2AVK5 314 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Atxn7l3A2AWT3 347 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Gm44501A8R0T9 150 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Olfr92L7N475 312 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Spsb2O88838 264 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Scd2P13011 358 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Cd27P41272 250 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Sult2a2P50236 285 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Actg1P63260 375 aaKnown RBP9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Gm614Q3V2K1 191 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Lhfpl4Q5U4E0 247 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Tgfbr2Q62312 592 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Pramel5Q7TPY4 500 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Asphd2Q80VP9 343 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Tmem129Q8K304 362 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Mnd1Q8K396 205 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Plcz1Q8K4D7 647 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Vmn1r74Q8R290 304 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Vmn1r32Q8R2D9 302 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Olfr1462Q8VFW3 307 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Lamtor1Q9CQ22 161 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Ndufb7Q9CR61 137 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Tmem160Q9D938 188 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Tex43Q9D9I1 141 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Krt81Q9ERE2 481 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Cbln3Q9JHG0 197 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Nqo2Q9JI75 231 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Uchl1Q9R0P9 223 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Hspg2Q05793 3707 aaKnown RBP9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Brwd1Q921C3 2304 aa9.79□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Tmem156A0A1D5RLR8 321 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Olfr1496B9EHG2 317 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Gm10477F6SW83 55 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Vmn1r13G5E8I3 300 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 IfnabL7MTU6 190 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Olfr1329L7MTV4 313 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Mtnd6P03925 172 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Saa2P05367 122 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Pdcd6P12815 191 aaKnown RBP9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Cd79bP15530 228 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 GbaP17439 515 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Patz1Q5NBY9 687 aaKnown RBP9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Trav2Q5R1I9 109 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Olfr1477Q7TQQ7 315 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 HeltQ7TS99 240 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 TigarQ8BZA9 269 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Ing4Q8C0D7 249 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Scgb2b26Q8JZX1 112 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Fam174bQ8K064 153 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Dync2li1Q8K0T2 351 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Vmn1r62Q8R2C0 300 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 OtosQ8R448 89 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Olfr1347Q8VF33 319 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Rbm39Q8VH51 530 aaKnown RBP9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Mrm2Q9CPY0 246 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Snu13Q9D0T1 128 aaKnown RBP9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Dmac2Q9D7K5 258 aaKnown RBP9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Timm50Q9D880 353 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Znf22Q9ERU3 237 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Fbxw4Q9JMJ2 410 aa9.78□□□□□ -0.84
Ccdc28a-202ENSMUST00000080860 Igkv1-135A0A0B4J1H7 120 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 Gm21083A0A0G2JFD5 256 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 Zfp345A2AQA1 561 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 Esp16A8R0U9 85 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 Ankrd29D3YVV3 309 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 A930017K11RikE0CXQ2 571 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 Glp1rO35659 463 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 Klrd1O54707 179 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 P04943 107 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 AhrP30561 848 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 Rab18P35293 206 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 Isoc2aP85094 206 aa9.77□□□□□ -0.85
Ccdc28a-202ENSMUST00000080860 Q08AU9 97 aa9.77□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 50.7 ms